RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DHRS4L2Q6PKH6 230 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 POTEHQ6S545 545 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 B3GALNT2Q8NCR0 500 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 ZNF696Q9H7X3 374 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.53
U2AF1-209ENST00000475639 ERN1O75460 977 aaKnown RBP11.71□□□□□ -0.54
U2AF1-209ENST00000475639 HMBSP08397 361 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 BGNP21810 368 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 ADSSP30520 456 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 FMO5P49326 533 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 CSNK2BP67870 215 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 BOLA3Q53S33 107 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 HYIQ5T013 277 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 POTEGQ6S5H5 508 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 PCDHB18PQ96TA0 734 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 NEURL2Q9BR09 285 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 COA1Q9GZY4 146 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 TRIM17Q9Y577 477 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 TM9SF1O15321 606 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 ATG7O95352 703 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 TNFAIP8O95379 198 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 S100A6P06703 90 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 RAG1P15918 1043 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 RGS7P49802 495 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 VAC14Q08AM6 782 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 ATP1A4Q13733 1029 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 DDR2Q16832 855 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 IRAK1BP1Q5VVH5 260 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 FBXO42Q6P3S6 717 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 BANPQ8N9N5 519 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.54
U2AF1-209ENST00000475639 HEPHQ9BQS7 1158 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 LXNQ9BS40 222 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 KCNQ5Q9NR82 932 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 FEM1BQ9UK73 627 aa11.71□□□□□ -0.54
U2AF1-209ENST00000475639 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 PHGDHO43175 533 aaKnown RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ADCY6O43306 1168 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 TIMM44O43615 452 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 OXSR1O95747 527 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ALOX12P18054 663 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 MYL12AP19105 171 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 YWHABP31946 246 aaKnown RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 SLC25A3Q00325 362 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 AKIRIN2Q53H80 203 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ESRP1Q6NXG1 681 aaKnown RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 CASP12Q6UXS9 341 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 CACTIN-AS1Q8N1I8 211 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 SETD9Q8NE22 299 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 NACC2Q96BF6 587 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 C1orf21Q9H246 121 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ING3Q9NXR8 418 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 TUBA8Q9NY65 449 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 RRN3Q9NYV6 651 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 TPRKBQ9Y3C4 175 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 A0A1B0GTW7 788 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ASB14A6NK59 587 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 PRR5-ARHGAP8B1AHC4 643 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 EML1O00423 815 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 PRRG1O14668 218 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 CYP7B1O75881 506 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 FASP25445 335 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 SLC12A3P55017 1021 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ARHGAP8P85298 464 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 MAPK11Q15759 364 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 USP41Q3LFD5 358 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 COMMD2Q86X83 199 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF671Q8TAW3 534 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 MZB1Q8WU39 189 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 COX4I2Q96KJ9 171 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ARPC5LQ9BPX5 153 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 BDH2Q9BUT1 245 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 CCDC106Q9BWC9 280 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 C6orf62Q9GZU0 229 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 KLHL1Q9NR64 748 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 TRPC4Q9UBN4 977 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 RSL24D1Q9UHA3 163 aaKnown RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 SLC24A2Q9UI40 661 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 DUSP12Q9UNI6 340 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 NR2E3Q9Y5X4 410 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 CDC40O60508 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 OGFRL1Q5TC84 451 aaPredicted RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 DCP1BQ8IZD4 617 aaKnown RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 ORAI2Q96SN7 254 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM117Q9H0C3 514 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 RAVER2Q9HCJ3 691 aaKnown RBP11.7□□□□□ -0.54
U2AF1-209ENST00000475639 PADI4Q9UM07 663 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 MYPNQ86TC9 1320 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
U2AF1-209ENST00000475639 GNG14A0A1W2PPG7 69 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 F5H6K3 240 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 H3BNX3 289 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 DYNC1LI2O43237 492 aaPredicted RBP11.69□□□□□ -0.54
U2AF1-209ENST00000475639 ITM2AO43736 263 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 BMP10O95393 424 aa11.69□□□□□ -0.54
U2AF1-209ENST00000475639 KLRC2P26717 231 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms