RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 METTL5Q9NRN9 209 aaKnown RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 INTS6Q9UL03 887 aaKnown RBP16.08■□□□□ 0.16
CPSF3-203ENST00000475482 CYP8B1Q9UNU6 501 aa16.08■□□□□ 0.16
CPSF3-203ENST00000475482 PCDH15Q96QU1 1955 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 CDX4O14627 284 aaPredicted RBP16.07■□□□□ 0.16
CPSF3-203ENST00000475482 PSTPIP1O43586 416 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 APOEP02649 317 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 GPD1P21695 349 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 ITPKAP23677 461 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 PSMA2P25787 234 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 CTNNA1P35221 906 aaKnown RBP16.07■□□□□ 0.16
CPSF3-203ENST00000475482 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
CPSF3-203ENST00000475482 IRX4P78413 519 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 ZNF33AQ06730 810 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 LMAN2Q12907 356 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 HADHQ16836 314 aaKnown RBP16.07■□□□□ 0.16
CPSF3-203ENST00000475482 DCAF6Q58WW2 860 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 SLC23A3Q6PIS1 610 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 SERPINA13PQ6UXR4 307 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 RHOT1Q8IXI2 618 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 CYB5D2Q8WUJ1 264 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 NT5C3BQ969T7 300 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 ERLEC1Q96DZ1 483 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 BTBD6Q96KE9 485 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 GOLPH3Q9H4A6 298 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 WSB2Q9NYS7 404 aaPredicted RBP16.07■□□□□ 0.16
CPSF3-203ENST00000475482 PACSIN2Q9UNF0 486 aaPredicted RBP16.07■□□□□ 0.16
CPSF3-203ENST00000475482 PLA2G4CQ9UP65 541 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 PCDHA3Q9Y5H8 950 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 KNL1Q8NG31 2342 aa16.07■□□□□ 0.16
CPSF3-203ENST00000475482 CTAGE15A4D2H0 777 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 SYNCRIPO60506 623 aaKnown RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 DAB1O75553 588 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 LUC7L3O95232 432 aaKnown RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 ATP5BP06576 529 aaKnown RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 EPHX1P07099 455 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 CTAGE8P0CG41 777 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 SLC2A3P11169 496 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 HLA-EP13747 358 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 TACR2P21452 398 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 RFC1P35251 1148 aaPredicted RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 CETN2P41208 172 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 SSR1P43307 286 aaKnown RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 ZNF143P52747 638 aaPredicted RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 RWDD2BP57060 319 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 ODF2Q5BJF6 829 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 FSCBQ5H9T9 825 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 LRRC38Q5VT99 294 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 OTUD1Q5VV17 481 aaPredicted RBP16.06■□□□□ 0.16
CPSF3-203ENST00000475482 CTAGE6Q86UF2 777 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 MFN1Q8IWA4 741 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 CTAGE4Q8IX94 777 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 KDM1BQ8NB78 822 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 OR2T3Q8NH03 318 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 CNPY3Q9BT09 278 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 ADAMTS9Q9P2N4 1935 aa16.06■□□□□ 0.16
CPSF3-203ENST00000475482 GRAP2O75791 330 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 MOCS2O96007 188 aaPredicted RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 PDGFRAP16234 1089 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 POLR2EP19388 210 aaKnown RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 CD6P30203 668 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 SDC4P31431 198 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 CCR1P32246 355 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 NOS2P35228 1153 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 DNA2P51530 1060 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 TPMTP51580 245 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 MTA1Q13330 715 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 TRIM61Q5EBN2 209 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 SEL1L2Q5TEA6 688 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 RAP1GAP2Q684P5 730 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 KIAA1324Q6UXG2 1013 aaKnown RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 LGI2Q8N0V4 545 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 CFAP52Q8N1V2 620 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 ATP6V0D2Q8N8Y2 350 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 MYRIPQ8NFW9 859 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 PRCCQ92733 491 aaPredicted RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 PGAP3Q96FM1 320 aaPredicted RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 SIPA1Q96FS4 1042 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 MRGPRX3Q96LB0 322 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 PSMB7Q99436 277 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 NPY6RQ99463 290 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 ADAM33Q9BZ11 813 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 FBRSQ9HAH7 460 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 CAPN10Q9HC96 672 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 PRSS16Q9NQE7 514 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 DDIT4Q9NX09 232 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 DDX56Q9NY93 547 aaKnown RBP16.05■□□□□ 0.16
CPSF3-203ENST00000475482 STIM2Q9P246 746 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 TMEM59LQ9UK28 342 aa16.05■□□□□ 0.16
CPSF3-203ENST00000475482 TYW5A2RUC4 315 aaKnown RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 C2CD4BA6NLJ0 364 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 C4orf47A7E2U8 309 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 PGRMC1O00264 195 aaKnown RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 DDX3YO15523 660 aaKnown RBP16.04■□□□□ 0.16
CPSF3-203ENST00000475482 SRGAP2O75044 1071 aa16.04■□□□□ 0.16
CPSF3-203ENST00000475482 GJB6O95452 261 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms