RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 GOT1P17174 413 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 GLDCP23378 1020 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 RDXP35241 583 aaKnown RBP14.47□□□□□ -0.09
UPF3A-204ENST00000475218 GRIA4P48058 902 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 OXCT1P55809 520 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 PPP2CBP62714 309 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 PPP2CAP67775 309 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 ATP11AP98196 1134 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 TYRO3Q06418 890 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 DLG2Q15700 870 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 FKBP15Q5T1M5 1219 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 CCDC183Q5T5S1 534 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 TFAP2DQ7Z6R9 452 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 OR2T34Q8NGX1 318 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 BAHD1Q8TBE0 780 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-204ENST00000475218 GANCQ8TET4 914 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 SLC6A18Q96N87 628 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 SPAG5Q96R06 1193 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 C11orf70Q9BRQ4 267 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 SCNM1Q9BWG6 230 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 PCOLCE2Q9UKZ9 415 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 PPM1HQ9ULR3 514 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 NCKAP1Q9Y2A7 1128 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 A0A1W2PPC4 97 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 TCRBV5S1A1TA0A578 114 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 HYAL3O43820 417 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-204ENST00000475218 ZNF821O75541 412 aaPredicted RBP14.47□□□□□ -0.09
UPF3A-204ENST00000475218 ADH1BP00325 375 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 IL1BP01584 269 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 CTSKP43235 329 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 MANEALQ5VSG8 457 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 AOPEPQ8N6M6 819 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 OR7D4Q8NG98 312 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 RXFP2Q8WXD0 754 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 GATA6Q92908 595 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 HAPLN3Q96S86 360 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 OMDQ99983 421 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 TM7SF3Q9NS93 570 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 BTBD3Q9Y2F9 522 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 DAAM1Q9Y4D1 1078 aa14.47□□□□□ -0.09
UPF3A-204ENST00000475218 A0A1W2PR77 199 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 FAM72CH0Y354 149 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 MCF2LO15068 1137 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 TEX33O43247 280 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 RTN2O75298 545 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 ZMPSTE24O75844 475 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 RHOCP08134 193 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 DEKP35659 375 aaKnown RBP14.46□□□□□ -0.09
UPF3A-204ENST00000475218 STAT1P42224 750 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 GSCP56915 257 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-204ENST00000475218 TAS2R38P59533 333 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 UBXN1Q04323 297 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 CLEC16AQ2KHT3 1053 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 POM121L1PQ3SYA9 428 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 FAM72AQ5TYM5 149 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 AGBL4Q5VU57 503 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 FAM72DQ6L9T8 149 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 LINGO4Q6UY18 593 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 SND1Q7KZF4 910 aaKnown RBP eCLIP14.46□□□□□ -0.09
UPF3A-204ENST00000475218 SETD3Q86TU7 594 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-204ENST00000475218 FAM72BQ86X60 149 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 OR2A12Q8NGT7 310 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 CENPIQ92674 756 aaPredicted RBP14.46□□□□□ -0.09
UPF3A-204ENST00000475218 SYT11Q9BT88 431 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 MUC3BQ9H195 1237 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 NDFIP2Q9NV92 336 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 ARHGAP20Q9P2F6 1191 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 SLC25A13Q9UJS0 675 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 KLK13Q9UKR3 277 aa14.46□□□□□ -0.09
UPF3A-204ENST00000475218 H0Y8X5 98 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 LATO43561 262 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CER1O95813 267 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 MBD3O95983 291 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 RRM1P23921 792 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 RFC1P35251 1148 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-204ENST00000475218 ADRA1BP35368 520 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 NNMTP40261 264 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CCR5P51681 352 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 HDAC4P56524 1084 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CNTN1Q12860 1018 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 TRIP6Q15654 476 aaKnown RBP14.45□□□□□ -0.1
UPF3A-204ENST00000475218 ST3GAL2Q16842 350 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 ACCSLQ4AC99 568 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-204ENST00000475218 TRIM72Q6ZMU5 477 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 MON1BQ7L1V2 547 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 RAB44Q7Z6P3 723 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-204ENST00000475218 PHF13Q86YI8 300 aaPredicted RBP14.45□□□□□ -0.1
UPF3A-204ENST00000475218 DCAF4L2Q8NA75 395 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 MSANTD4Q8NCY6 345 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 NEK11Q8NG66 645 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 OR14C36Q8NHC7 312 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 VOPP1Q96AW1 172 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 TOR4AQ9NXH8 423 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 ACTL7AQ9Y615 435 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 LRRC72A6NJI9 287 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 VILLO15195 856 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 SRGAP2O75044 1071 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CD160O95971 181 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 PTPN9P43378 593 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms