RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 USP50Q70EL3 339 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 DYMQ7RTS9 669 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SETD3Q86TU7 594 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 C11orf74Q86VG3 221 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TTC30AQ86WT1 665 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GRAMD2AQ8IUY3 354 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ANKMY2Q8IV38 441 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 FUNDC1Q8IVP5 155 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PALM2Q8IXS6 379 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ADGRF4Q8IZF3 695 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ANKRD42Q8N9B4 389 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 KDM1BQ8NB78 822 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PPFIBP2Q8ND30 876 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MGARPQ8TDB4 240 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TTC17Q96AE7 1141 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GMCL1Q96IK5 515 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CSRNP1Q96S65 589 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MECRQ9BV79 373 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GON7Q9BXV9 100 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 EHD1Q9H4M9 534 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 FAM124BQ9H5Z6 455 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 HEXA-AS1Q9H8Q6 139 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 APOBEC3GQ9HC16 384 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 SYTL2Q9HCH5 934 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TMEM8AQ9HCN3 771 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GINM1Q9NU53 330 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 GPRC5DQ9NZD1 345 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MTUS1Q9ULD2 1270 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CCDC194A0A1B0GVG4 234 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 H3BQ06 376 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 LSM8O95777 96 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 P4HA1P13674 534 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SPNP16150 400 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CYP7A1P22680 504 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 HTR1BP28222 390 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TYK2P29597 1187 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SSTR1P30872 391 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CCR3P51677 355 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 COPAP53621 1224 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ALDH18A1P54886 795 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 SESN3P58005 492 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ARPC4P59998 168 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CHRNA2Q15822 529 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MICAQ29983 383 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TIGD2Q4W5G0 525 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SLC9B1Q4ZJI4 515 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TCERG1LQ5VWI1 586 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 KRT39Q6A163 491 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 TMEM214Q6NUQ4 689 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 PPP1R2P3Q6NXS1 205 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MFSD7Q6UXD7 560 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 FKBP9P1Q75LS8 142 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 ZC3HC1Q86WB0 502 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 GPBP1Q86WP2 473 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 RHOT1Q8IXI2 618 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 OSCARQ8IYS5 282 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 POU5F2Q8N7G0 328 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 OR7D4Q8NG98 312 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 OR10Z1Q8NGY1 313 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 FGF11Q92914 225 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 C18orf25Q96B23 403 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 TRIM11Q96F44 468 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CCDC97Q96F63 343 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 FAR2Q96K12 515 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 RDH12Q96NR8 316 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 RAD9AQ99638 391 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CGRRF1Q99675 332 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 DRC3Q9H069 523 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 C2orf40Q9H1Z8 148 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 LHX5Q9H2C1 402 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 FAM96AQ9H5X1 160 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 XAB2Q9HCS7 855 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 NECTIN3Q9NQS3 549 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MAP10Q9P2G4 905 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SLCO3A1Q9UIG8 710 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PSME2Q9UL46 239 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CNOT6Q9ULM6 557 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 TBC1D24Q9ULP9 559 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 NEU3Q9UQ49 428 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 FRMD4BQ9Y2L6 1034 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PCDHA11Q9Y5I1 949 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CITO14578 2027 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 OBSL1O75147 1896 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 MAGEB16A2A368 324 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PRORSD1PA6NEY8 169 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 USP17L5A8MUK1 530 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CYB561D2O14569 222 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SLC9A3R1O14745 358 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 ZBTB5O15062 677 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 SLC16A6O15403 523 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CAPN5O15484 640 aaPredicted RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 MTRF1O75570 445 aaKnown RBP4.18□□□□□ -1.74
USP16-205ENST00000474835 DDHD2O94830 711 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 RALBP11234 206 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 BMP3P12645 472 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PLS3P13797 630 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 NFKBIAP25963 317 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 S100A5P33763 92 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 CDK8P49336 464 aa4.18□□□□□ -1.74
USP16-205ENST00000474835 PPP2R2BQ00005 443 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms