RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 KAT7O95251 611 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 SLC3A2P08195 630 aaKnown RBP3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 CYP3A4P08684 503 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 PAX3P23760 479 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 DUSP1P28562 367 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 STAT6P42226 847 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 MAPK9P45984 424 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 AGTR2P50052 363 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 ACTR2P61160 394 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 RBM6P78332 1123 aaKnown RBP3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 TLE3Q04726 772 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 EFR3AQ14156 821 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 C6orf10Q5SRN2 563 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 LIPMQ5VYY2 423 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 HMBOX1Q6NT76 420 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 CUZD1Q86UP6 607 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 LRRTM4Q86VH4 590 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 TMPRSS12Q86WS5 348 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 CPOQ8IVL8 374 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 SLC2A12Q8TD20 617 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 CLEC4CQ8WTT0 213 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 KAT2BQ92831 832 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 SDCCAG3Q96C92 435 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 SF3B5Q9BWJ5 86 aaKnown RBP3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 RNF26Q9BY78 433 aaPredicted RBP3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 SELENONQ9NZV5 590 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 IPO11Q9UI26 975 aaKnown RBP3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 GJD2Q9UKL4 321 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 GTF2A1LQ9UNN4 478 aa3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 LRRFIP2Q9Y608 721 aaKnown RBP3.96□□□□□ -1.78
TMEM50B-208ENST00000474272 RPS10-NUDT3A0A1W2PQS6 291 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 TTC34A8MYJ7 566 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ACOT8O14734 319 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 CAMTA2O94983 1202 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 TFRCP02786 760 aaKnown RBP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 WNT1P04628 370 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 IGFBP2P18065 325 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 RXRAP19793 462 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 GRK5P34947 590 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 AARSP49588 968 aaKnown RBP eCLIP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ENTPD1P49961 510 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 PAPOLAP51003 745 aaKnown RBP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 RRP1P56182 461 aaKnown RBP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 KEAP1Q14145 624 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 SLC4A8Q2Y0W8 1093 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 TBRG1Q3YBR2 411 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 LRRC24Q50LG9 513 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ZNF569Q5MCW4 686 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ANKRD45Q5TZF3 282 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ASPHD1Q5U4P2 390 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 WDR93Q6P2C0 686 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 KIAA1324Q6UXG2 1013 aaKnown RBP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 RASGRP2Q7LDG7 609 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ANKS1BQ7Z6G8 1248 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 CTU1Q7Z7A3 348 aaKnown RBP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ZNF329Q86UD4 541 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 LAS2Q8IYD9 372 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 CEP70Q8NHQ1 597 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 ASB12Q8WXK4 309 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 HERVK_113Q902F9 699 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 LPAR1Q92633 364 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 COG8Q96MW5 612 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 RASSF1Q9NS23 344 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 GGA3Q9NZ52 723 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 C9orf78Q9NZ63 289 aaPredicted RBP3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 SLC12A4Q9UP95 1085 aa3.95□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3DA0A087WVF3 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3IA0A087WXS9 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3EA0A087X179 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3KA0A087X1G2 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3BA6NDS4 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3FA6NER0 549 aaPredicted RBP3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 RRN3P2A6NIE6 340 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3LB9A6J9 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 STX16-NPEPL1H3BU86 382 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 STX16O14662 325 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 SPTLC2O15270 562 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 AGR2O95994 175 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 ENO1P06733 434 aaKnown RBP3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 CSF1P09603 554 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3HP0C7X1 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 SLC8A1P32418 973 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 CIITAP33076 1130 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 MCM2P49736 904 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 RCAN1P53805 252 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 DCTN1Q14203 1278 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TAF12Q16514 161 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 ALFQ53S48 1182 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 ZNF484Q5JVG2 852 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 WASHC2DQ5SRD0 308 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 PRAMEF19Q5SWL8 479 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 GFI1BQ5VTD9 330 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3GQ6DHY5 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3CQ6IPX1 549 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 SLC39A5Q6ZMH5 540 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 SYNE3Q6ZMZ3 975 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 RINLQ6ZS11 566 aa3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 RBM23Q86U06 439 aaKnown RBP3.94□□□□□ -1.78
TMEM50B-208ENST00000474272 TBC1D3Q8IZP1 549 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms