RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ACOT1Q86TX2 421 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TLK2Q86UE8 772 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TRABD2AQ86V40 505 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 PSTKQ8IV42 348 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TMEM192Q8IY95 271 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SIX6OS1Q8N1H7 587 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 C7orf31Q8N865 590 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ANKRD52Q8NB46 1076 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 FAM172AQ8WUF8 416 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SOCS4Q8WXH5 440 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 CPT1BQ92523 772 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 NKD1Q969G9 470 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 LRRC39Q96DD0 335 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 HSFY1Q96LI6 401 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 RNF157Q96PX1 679 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 RAB3IPQ96QF0 476 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TWNKQ96RR1 684 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 DIRC2Q96SL1 478 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 HERPUD2Q9BSE4 406 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SPON2Q9BUD6 331 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 APOL6Q9BWW8 343 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SDCBP2Q9H190 292 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ADAM7Q9H2U9 754 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 NSUN3Q9H649 340 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SPC25Q9HBM1 224 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 LRRC4Q9HBW1 653 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 XAB2Q9HCS7 855 aaKnown RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 TXLNGQ9NUQ3 528 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SETD4Q9NVD3 440 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 HAUS2Q9NVX0 235 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 SNTG2Q9NY99 539 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 RCOR3Q9P2K3 495 aaPredicted RBP6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 HMGXB4Q9UGU5 601 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF281Q9Y2X9 895 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 Q9Y3F1 56 aa6.07□□□□□ -1.44
ATPAF1-204ENST00000474020 BCLAF3A2AJT9 711 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 MANSC4A6NHS7 340 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 KPNA7A9QM74 516 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ANKRD65E5RJM6 399 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 E7ESA3 106 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 GOLGA8MH3BSY2 632 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TRDMT1O14717 391 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 KCNN4O15554 427 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 SNX3O60493 162 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 HNRNPCL1O60812 293 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 KRT38O76015 456 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 RECQL4O94761 1208 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 F2P00734 622 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 IQCF3P0C7M6 154 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ETS1P14921 441 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 KCNE1P15382 129 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TCF4P15884 667 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 PAX3P23760 479 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 IL1R2P27930 398 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ADORA2BP29275 332 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC8A1P32418 973 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TRHRP34981 398 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 FDFT1P37268 417 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 SERPINB9P50453 376 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF135P52742 658 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CRYBB1P53674 252 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 AIF1P55008 147 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ZNF200P98182 395 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 PPARDQ03181 441 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CHRNEQ04844 493 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 DUSP4Q13115 394 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ZKSCAN8Q15776 578 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 SNCBQ16143 134 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 PPP6R3Q5H9R7 873 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 GJC2Q5T442 439 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 HEATR6Q6AI08 1181 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TXNRD3NBQ6F5E7 133 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TWF2Q6IBS0 349 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 C1orf228Q6PIY5 440 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 OLFML1Q6UWY5 402 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 VSTM1Q6UX27 236 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 RGS9BPQ6ZS82 235 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 C3orf62Q6ZUJ4 267 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 SLC26A9Q7LBE3 791 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 STRADAQ7RTN6 431 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 PIGWQ7Z7B1 504 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ZC3H18Q86VM9 953 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 ADGRF2Q8IZF7 708 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TMEM86AQ8N2M4 240 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 NAT8LQ8N9F0 302 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CCDC63Q8NA47 563 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 FBXO36Q8NEA4 188 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 BRI3BPQ8WY22 251 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CCT6BQ92526 530 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 CDKL2Q92772 493 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 MTBPQ96DY7 904 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 EAF1Q96JC9 268 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TOX2Q96NM4 488 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 PAFAH2Q99487 392 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 MRPL45Q9BRJ2 306 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 MED10Q9BTT4 135 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 TUBB6Q9BUF5 446 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 RNF32Q9H0A6 362 aa6.06□□□□□ -1.44
ATPAF1-204ENST00000474020 DHX35Q9H5Z1 703 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms