RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GOLGA3Q08378 1498 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 RAPGEF2Q9Y4G8 1499 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 URB2Q14146 1524 aaKnown RBP2.09□□□□□ -2.07
CCDC39-203ENST00000473854 TOPBP1Q92547 1522 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 LOC105371045A0A1W2PR82 267 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 C3orf70A6NLC5 250 aaPredicted RBP2.09□□□□□ -2.07
CCDC39-203ENST00000473854 COQ9O75208 318 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 CT47B1P0C2W7 299 aaPredicted RBP2.09□□□□□ -2.07
CCDC39-203ENST00000473854 PF4V1P10720 104 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 CETPP11597 493 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ALADP13716 330 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 KCNA5P22460 613 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ALDH4A1P30038 563 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ECT2LQ008S8 904 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 CALCRLQ16602 461 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF484Q5JVG2 852 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ZC2HC1BQ5TFG8 222 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF497Q6ZNH5 498 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 SLC26A9Q7LBE3 791 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 KRT27Q7Z3Y8 459 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 P2RY8Q86VZ1 359 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 EPHX4Q8IUS5 362 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ADGRF3Q8IZF5 1079 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 LRRC57Q8N9N7 239 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 CNBD1Q8NA66 436 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 PRPF38AQ8NAV1 312 aaKnown RBP2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ZNF114Q8NC26 417 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 CADM4Q8NFZ8 388 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 PJA1Q8NG27 643 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ADAD1Q96M93 576 aaKnown RBP2.09□□□□□ -2.07
CCDC39-203ENST00000473854 NUDT22Q9BRQ3 303 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 ASPSCR1Q9BZE9 553 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 EBF2Q9HAK2 575 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 OGDHLQ9ULD0 1010 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 RAP2CQ9Y3L5 183 aa2.09□□□□□ -2.07
CCDC39-203ENST00000473854 EIF4G3O43432 1585 aaKnown RBP2.09□□□□□ -2.08
CCDC39-203ENST00000473854 ADAMTS12P58397 1594 aa2.09□□□□□ -2.08
CCDC39-203ENST00000473854 USP19O94966 1318 aa2.09□□□□□ -2.08
CCDC39-203ENST00000473854 POLA1P09884 1462 aaPredicted RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 FANCD2Q9BXW9 1451 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 CEP164Q9UPV0 1460 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 WDR62O43379 1518 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 PCF11O94913 1555 aaKnown RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ZSCAN9O15535 394 aaPredicted RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 IGSF3O75054 1194 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 MMP3P08254 477 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ARP10275 920 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ENO3P13929 434 aaPredicted RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 TIMP3P35625 211 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 PPP3CCP48454 512 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 CDH12P55289 794 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 DSCR10P59022 87 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 SYT16Q17RD7 645 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 XKR9Q5GH70 373 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 FAXCQ5TGI0 409 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ARHGAP11AQ6P4F7 1023 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 TMEM71Q6P5X7 295 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 KRT28Q7Z3Y7 464 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 CMASQ8NFW8 434 aaPredicted RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF501Q96CX3 271 aaPredicted RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 MTBPQ96DY7 904 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF599Q96NL3 588 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 AIFM3Q96NN9 605 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 C22orf23Q9BZE7 217 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 PNMA8BQ9ULN7 279 aaPredicted RBP2.08□□□□□ -2.08
CCDC39-203ENST00000473854 WASHC2CQ9Y4E1 1318 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 CHD1O14646 1710 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 AGRNO00468 2067 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 EEA1Q15075 1411 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 CEP162Q5TB80 1403 aa2.08□□□□□ -2.08
CCDC39-203ENST00000473854 ARAP1Q96P48 1450 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 PRXQ9BXM0 1461 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ABCA10Q8WWZ4 1543 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 SAMD9Q5K651 1589 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.07□□□□□ -2.08
CCDC39-203ENST00000473854 CFAP69A5D8W1 941 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 RTL8CO15255 209 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 CRLF1O75462 422 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ALDOAP04075 364 aaKnown RBP2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ALDOCP09972 364 aaKnown RBP2.07□□□□□ -2.08
CCDC39-203ENST00000473854 PRG2P13727 222 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ATICP31939 592 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 THPOP40225 353 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 MXI1P50539 228 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 P3H1Q32P28 736 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 TCTE1Q5JU00 501 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 RNF187Q5TA31 235 aaPredicted RBP2.07□□□□□ -2.08
CCDC39-203ENST00000473854 MRNIPQ6NTE8 343 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 USP17L6PQ6QN14 398 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 RNF44Q7L0R7 432 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 HORMAD2Q8N7B1 307 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 EXD3Q8N9H8 876 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ADAD2Q8NCV1 583 aaKnown RBP2.07□□□□□ -2.08
CCDC39-203ENST00000473854 PPP1R35Q8TAP8 253 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 OR1F2PQ96R84 312 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 F2RL3Q96RI0 385 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 B3GNT5Q9BYG0 378 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 LRRC27Q9C0I9 530 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF287Q9HBT7 754 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF304Q9HCX3 659 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms