RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SLFN11Q7Z7L1 901 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 MCOLN2Q8IZK6 566 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 RYBPQ8N488 228 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-222ENST00000473373 OR14C36Q8NHC7 312 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ZNF653Q96CK0 615 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D31Q96DN5 1066 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 LMLNQ96KR4 655 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ADAM33Q9BZ11 813 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 RSPH9Q9H1X1 276 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-222ENST00000473373 SLC32A1Q9H598 525 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ANLNQ9NQW6 1124 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 PARVAQ9NVD7 372 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 MYO1AQ9UBC5 1043 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 DNAI1Q9UI46 699 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ITIH6Q6UXX5 1313 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 METTL12A8MUP2 240 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 ARHGAP33O14559 1287 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 BCAT2O15382 392 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-222ENST00000473373 CCP110O43303 1012 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 CBFA2T2O43439 604 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 SNAP91O60641 907 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 RNF8O76064 485 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 KCNK5O95279 499 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 TPM1P09493 284 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 SKILP12757 684 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 VAV1P15498 845 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 C5AR1P21730 350 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 RRM1P23921 792 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 ADRA1BP35368 520 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 ETFBP38117 255 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 NOVA1P51513 510 aaKnown RBP11.81□□□□□ -0.52
CPNE1-222ENST00000473373 PLK1P53350 603 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 NR1I3Q14994 352 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
CPNE1-222ENST00000473373 C9orf64Q5T6V5 341 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 RETSATQ6NUM9 610 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 LINGO4Q6UY18 593 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-222ENST00000473373 Q6ZVU0 165 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 USP30Q70CQ3 517 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 IRF2BP2Q7Z5L9 587 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 SH2D3CQ8N5H7 860 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 DCAF4L2Q8NA75 395 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 OR7D4Q8NG98 312 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 BAP1Q92560 729 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 PTPRN2Q92932 1015 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 TRIM11Q96F44 468 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 MYO19Q96H55 970 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 EPAS1Q99814 870 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 PCED1AQ9H1Q7 454 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 C6orf106Q9H6K1 298 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-222ENST00000473373 VPS51Q9UID3 782 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D30Q9Y2I9 924 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 SCINQ9Y6U3 715 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 TDRD6O60522 2096 aaKnown RBP11.81□□□□□ -0.52
CPNE1-222ENST00000473373 CHD5Q8TDI0 1954 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
CPNE1-222ENST00000473373 CFAP47Q6ZTR5 3102 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 PCDH15Q96QU1 1955 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 A0A0D9SEW6 157 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 ILVBLA1L0T0 632 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 KPNA3O00505 521 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 DAPK3O43293 454 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 RTN2O75298 545 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 ENDOD1O94919 500 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 IGLV3-19P01714 112 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 FTLP02792 175 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 PLEKP08567 350 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 EPHB2P29323 1055 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 ZNF143P52747 638 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 GSCP56915 257 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 C21orf59P57076 290 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 RPL7AP62424 266 aaKnown RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 GNA12Q03113 381 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 CCDC15Q0P6D6 951 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 PTP4A2Q12974 167 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 RAB6CQ53S08 254 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 PSAPL1Q6NUJ1 521 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TMC6Q7Z403 805 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 TBC1D3Q8IZP1 549 aaPredicted RBP11.8□□□□□ -0.52
CPNE1-222ENST00000473373 MINDY1Q8N5J2 469 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 CCDC185Q8N715 623 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 OR52K2Q8NGK3 314 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 SKA1Q96BD8 255 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 VCPIP1Q96JH7 1222 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 CNPY3Q9BT09 278 aa11.8□□□□□ -0.52
CPNE1-222ENST00000473373 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms