RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 SCML4Q8N228 414 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF276Q8N554 614 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 PPP1R14CQ8TAE6 165 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ERP27Q96DN0 273 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 PABPC5Q96DU9 382 aaKnown RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MTBPQ96DY7 904 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 FUBP3Q96I24 572 aaKnown RBP eCLIP4.96□□□□□ -1.623e-9■■■■□ 19.4
TM4SF1-202ENST00000472441 C8orf48Q96LL4 319 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 LRRC37BQ96QE4 947 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 VAT1Q99536 393 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 PLCD4Q9BRC7 762 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 NAT9Q9BTE0 207 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 BRD8Q9H0E9 1235 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 RNF208Q9H0X6 261 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MYLK2Q9H1R3 596 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 RXFP1Q9HBX9 757 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 IARS2Q9NSE4 1012 aaKnown RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 C20orf96Q9NUD7 363 aaPredicted RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 PHF24Q9UPV7 400 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 STK38LQ9Y2H1 464 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CDY1Q9Y6F8 540 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 USH1CQ9Y6N9 552 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 NLRC5Q86WI3 1866 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MTMR11A4FU01 709 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 TMEM189-UBE2V1I3L0A0 370 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MAFKO60675 156 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ALDH1A2O94788 518 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 GALTP07902 379 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 NMBRP28336 390 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ETFBP38117 255 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CDK7P50613 346 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF135P52742 658 aaPredicted RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 C1QTNF8P60827 252 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ZBTB16Q05516 673 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 NIPAL4Q0D2K0 466 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CDH17Q12864 832 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 EIF4EBP2Q13542 120 aaPredicted RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ALFQ53S48 1182 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 SPANXN3Q5MJ09 141 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 STEAP4Q687X5 459 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 RNF43Q68DV7 783 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 KCTD11Q693B1 232 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 NAPEPLDQ6IQ20 393 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF449Q6P9G9 518 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 RGS9BPQ6ZS82 235 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CMC1Q7Z7K0 106 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 SLC25A41Q8N5S1 370 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 E2F7Q96AV8 911 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 KLHL29Q96CT2 875 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 KLHL5Q96PQ7 755 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 FICDQ9BVA6 458 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 NACA2Q9H009 215 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 HIPK3Q9H422 1215 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CCSER2Q9H7U1 834 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CAB39LQ9H9S4 337 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CASS4Q9NQ75 786 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 TLR8Q9NR97 1041 aaKnown RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 ZNF358Q9NW07 568 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MARCH5Q9NX47 278 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MARCH2Q9P0N8 246 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 MARCOQ9UEW3 520 aaPredicted RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 IPO11Q9UI26 975 aaKnown RBP4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 CHKBQ9Y259 395 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 TLR6Q9Y2C9 796 aa4.96□□□□□ -1.62
TM4SF1-202ENST00000472441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 OR6C75A6NL08 312 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 J3KR12 359 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 MATN3O15232 486 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 FGF10O15520 208 aaPredicted RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 ADAM12O43184 909 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 GNRH1P01148 92 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 ALDOAP04075 364 aaKnown RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 HLA-DQB2P05538 268 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 TARSP26639 723 aaKnown RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 HNRNPH1P31943 449 aaKnown RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 OR1D2P34982 312 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 NPY2RP49146 381 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 ALDH7A1P49419 539 aaKnown RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 ARFIP2P53365 341 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 PGGT1BP53609 377 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 KCNJ2P63252 427 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 CBLBQ13191 982 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 PDE1CQ14123 709 aaPredicted RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 SEPT6Q14141 434 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 MS4A13Q5J8X5 152 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 N4BP2L1Q5TBK1 243 aaPredicted RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 KIAA1841Q6NSI8 718 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.95□□□□□ -1.624e-11■□□□□ 9.2
TM4SF1-202ENST00000472441 MARK2Q7KZI7 788 aaKnown RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 BEND5Q7L4P6 421 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 NLRP9Q7RTR0 991 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 MTDHQ86UE4 582 aaKnown RBP4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 KCNMB4Q86W47 210 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 NPAS4Q8IUM7 802 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 CFAP52Q8N1V2 620 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 ARHGAP18Q8N392 663 aa4.95□□□□□ -1.62
TM4SF1-202ENST00000472441 DCLK2Q8N568 766 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms