RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 AVPR1AP37288 418 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 PBX3P40426 434 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 INHBEP58166 350 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 KDSRQ06136 332 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 ITGA9Q13797 1035 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 TFAP2DQ7Z6R9 452 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 KCNMB4Q86W47 210 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 CRLF3Q8IUI8 442 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 KIRREL3Q8IZU9 778 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 ATAD1Q8NBU5 361 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 AGR3Q8TD06 166 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 IRGQQ8WZA9 623 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 RAB3IPQ96QF0 476 aaPredicted RBP15.32■□□□□ 0.04
UBXN11-213ENST00000472155 PRDM16Q9HAZ2 1276 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 HS3ST4Q9Y661 456 aa15.32■□□□□ 0.04
UBXN11-213ENST00000472155 CAPN14A8MX76 684 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 PRR5-ARHGAP8B1AHC4 643 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.31■□□□□ 0.04
UBXN11-213ENST00000472155 GSC2O15499 205 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 AOC2O75106 756 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 USP1O94782 785 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 CKBP12277 381 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 MX2P20592 715 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 CNTFP26441 200 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 SLC8A1P32418 973 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 SLC1A6P48664 564 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 ARHGAP8P85298 464 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 TSPY1Q01534 308 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 KYAT3Q6YP21 454 aaKnown RBP15.31■□□□□ 0.04
UBXN11-213ENST00000472155 DENND6AQ8IWF6 608 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 CLPTM1LQ96KA5 538 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 CPNE1Q99829 537 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 BRD8Q9H0E9 1235 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 KCNK4Q9NYG8 393 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 VWA8A3KMH1 1905 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 BIRC5O15392 142 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 NCAM2O15394 837 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 PHGDHO43175 533 aaKnown RBP15.31■□□□□ 0.04
UBXN11-213ENST00000472155 GLRA3O75311 464 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 PMPCBO75439 489 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 HLA-DQB2P05538 268 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 CDC25CP30307 473 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 SERPINB6P35237 376 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 TM4SF4P48230 202 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 TUBP50607 506 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 RAB27AP51159 221 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 LIMK2P53671 638 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 TUBB3Q13509 450 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 IHHQ14623 411 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 GRM3Q14832 879 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 KHDC1Q4VXA5 237 aaKnown RBP15.31■□□□□ 0.04
UBXN11-213ENST00000472155 PIK3R6Q5UE93 754 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 FAM219BQ5XKK7 198 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 DENND5AQ6IQ26 1287 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 CCNJLQ8IV13 435 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 NSMCE1Q8WV22 266 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 RILPQ96NA2 401 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 BTBD10Q9BSF8 475 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 SHCBP1LQ9BZQ2 653 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 OSBPL2Q9H1P3 480 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 NOL6Q9H6R4 1146 aaKnown RBP15.31■□□□□ 0.04
UBXN11-213ENST00000472155 TLE6Q9H808 572 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 COPG2Q9UBF2 871 aa15.31■□□□□ 0.04
UBXN11-213ENST00000472155 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.31■□□□□ 0.04
UBXN11-213ENST00000472155 MEI4A8MW99 385 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 GJB3O75712 270 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ESRRAP11474 423 aaPredicted RBP15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ARPP19P56211 112 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 SREBF2Q12772 1141 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 USP4Q13107 963 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 CTBP1Q13363 440 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 MANEALQ5VSG8 457 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ZNF280DQ6N043 979 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ESRP1Q6NXG1 681 aaKnown RBP15.3■□□□□ 0.04
UBXN11-213ENST00000472155 MFSD6LQ8IWD5 586 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ATPAF2Q8N5M1 289 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.3■□□□□ 0.04
UBXN11-213ENST00000472155 NAT9Q9BTE0 207 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 FICDQ9BVA6 458 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 THAP1Q9NVV9 213 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 SLC39A10Q9ULF5 831 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 TLL2Q9Y6L7 1015 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 A0A096LPK6 155 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 GYG2O15488 501 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 CNTN5O94779 1100 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 C2P06681 752 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ACLYP53396 1101 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 MAXP61244 160 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 MPP1Q00013 466 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 GRTP1Q5TC63 336 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 CIR1Q86X95 450 aaPredicted RBP15.3■□□□□ 0.04
UBXN11-213ENST00000472155 APBB2Q92870 758 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 MCMBPQ9BTE3 642 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 ABCC13Q9NSE7 274 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 TRHDEQ9UKU6 1024 aa15.3■□□□□ 0.04
UBXN11-213ENST00000472155 PATJQ8NI35 1801 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms