RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF683Q8IZ20 524 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 SH2D3CQ8N5H7 860 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 MSANTD4Q8NCY6 345 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 CPA5Q8WXQ8 436 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 TMEM51Q9NW97 253 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 TOR4AQ9NXH8 423 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 PPM1HQ9ULR3 514 aa23.14■■□□□ 1.29
C9orf3-213ENST00000471978 TPX2Q9ULW0 747 aaKnown RBP23.14■■□□□ 1.29
C9orf3-213ENST00000471978 GOLGA8CPA6NN73 597 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 WNT9AO14904 365 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 MCF2LO15068 1137 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 ALOX15BO15296 676 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 BNIP3LO60238 219 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 RTN2O75298 545 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 MMEP08473 750 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 FLT3P36888 993 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 PPP2CBP62714 309 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 PPP2CAP67775 309 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 PRAMEF14Q5SWL7 426 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 ENOX1Q8TC92 643 aaKnown RBP23.13■■□□□ 1.29
C9orf3-213ENST00000471978 EPS8L1Q8TE68 723 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 FAM131CQ96AQ9 280 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 SERAC1Q96JX3 654 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 C1orf74Q96LT6 269 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 C2orf49Q9BVC5 232 aaPredicted RBP23.13■■□□□ 1.29
C9orf3-213ENST00000471978 VPS16Q9H269 839 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 TMPRSS4Q9NRS4 437 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 LMBRD1Q9NUN5 540 aa23.13■■□□□ 1.29
C9orf3-213ENST00000471978 A0A1B0GTQ1 180 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 SRRM3A6NNA2 597 aaPredicted RBP23.12■■□□□ 1.29
C9orf3-213ENST00000471978 DRGXA6NNA5 263 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 C1QTNF3-AMACRE9PGA6 284 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 SLC7A4O43246 635 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 LATO43561 262 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 MT-CO1P00395 513 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 POM121L1PQ3SYA9 428 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 ACBD5Q5T8D3 534 aaPredicted RBP23.12■■□□□ 1.29
C9orf3-213ENST00000471978 NAA35Q5VZE5 725 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 PKD1L2Q7Z442 2459 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 SETD3Q86TU7 594 aaPredicted RBP23.12■■□□□ 1.29
C9orf3-213ENST00000471978 PIP4K2CQ8TBX8 421 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 PSMB7Q99436 277 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 ELF4Q99607 663 aaPredicted RBP23.12■■□□□ 1.29
C9orf3-213ENST00000471978 KDM4CQ9H3R0 1056 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 MPP6Q9NZW5 540 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 TMEM59LQ9UK28 342 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 HS3ST2Q9Y278 367 aa23.12■■□□□ 1.29
C9orf3-213ENST00000471978 ANKRD11Q6UB99 2663 aaPredicted RBP23.12■■□□□ 1.29
C9orf3-213ENST00000471978 A0A1W2PR77 199 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 TNFSF14O43557 240 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 PLRG1O43660 514 aaKnown RBP23.11■■□□□ 1.29
C9orf3-213ENST00000471978 SNAP91O60641 907 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 SRCP12931 536 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 NOMO3P69849 1222 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 CNTN1Q12860 1018 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 INAVAQ3KP66 663 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 SLC45A4Q5BKX6 768 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 TRNP1Q6NT89 227 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 CCNI2Q6ZMN8 369 aaPredicted RBP23.11■■□□□ 1.29
C9orf3-213ENST00000471978 CLEC17AQ6ZS10 378 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 TFAP2DQ7Z6R9 452 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 PRPF39Q86UA1 669 aaKnown RBP23.11■■□□□ 1.29
C9orf3-213ENST00000471978 ATP11CQ8NB49 1132 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 CFAP57Q96MR6 1250 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 GANQ9H2C0 597 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 VPS51Q9UID3 782 aa23.11■■□□□ 1.29
C9orf3-213ENST00000471978 E9PAM4 449 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 SRGAP2O75044 1071 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 GFPT2O94808 682 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 DKK1O94907 266 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 TPM2P07951 284 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 KLK7P49862 253 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 KRT31Q15323 416 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 C6orf118Q5T5N4 469 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 AGBL4Q5VU57 503 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 CDKAL1Q5VV42 579 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 ZNF677Q86XU0 584 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 SLC20A1Q8WUM9 679 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 HAPLN3Q96S86 360 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 GDF3Q9NR23 364 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 ARHGAP20Q9P2F6 1191 aa23.1■■□□□ 1.29
C9orf3-213ENST00000471978 NOCTQ9UK39 431 aaKnown RBP23.1■■□□□ 1.29
C9orf3-213ENST00000471978 FARP1Q9Y4F1 1045 aaPredicted RBP23.1■■□□□ 1.29
C9orf3-213ENST00000471978 IGLV3-10A0A075B6K4 115 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 A0A0D9SEW6 157 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 K7ERQ8 282 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 TLR4O00206 839 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 OR1E1P30953 314 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 MAT2AP31153 395 aaKnown RBP23.09■■□□□ 1.29
C9orf3-213ENST00000471978 POLR2FP61218 127 aaKnown RBP23.09■■□□□ 1.29
C9orf3-213ENST00000471978 SCAPQ12770 1279 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 NAPEPLDQ6IQ20 393 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 ARCQ7LC44 396 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 BNIPLQ7Z465 357 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 FAM131BQ86XD5 332 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 GATAD2AQ86YP4 633 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 CCDC114Q96M63 670 aa23.09■■□□□ 1.29
C9orf3-213ENST00000471978 METTL5Q9NRN9 209 aaKnown RBP23.09■■□□□ 1.29
C9orf3-213ENST00000471978 FAM207AQ9NSI2 230 aaPredicted RBP23.09■■□□□ 1.29
C9orf3-213ENST00000471978 FTSJ1Q9UET6 329 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms