RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 SIK2Q9H0K1 926 aa17.75■□□□□ 0.43
RRP1-202ENST00000471909 SLC17A6Q9P2U8 582 aa17.75■□□□□ 0.43
RRP1-202ENST00000471909 ZNF212Q9UDV6 495 aa17.75■□□□□ 0.43
RRP1-202ENST00000471909 SFMBT1Q9UHJ3 866 aa17.75■□□□□ 0.43
RRP1-202ENST00000471909 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
RRP1-202ENST00000471909 NLRC5Q86WI3 1866 aa17.75■□□□□ 0.43
RRP1-202ENST00000471909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 ANKRD33BA6NCL7 494 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 USP12O75317 370 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 ZNF189O75820 626 aaPredicted RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 OAZ2O95190 189 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 TGDSO95455 350 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 BTBD8Q5XKL5 378 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 CHSY1Q86X52 802 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 OR52K1Q8NGK4 314 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 DPF3Q92784 378 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 CASP10Q92851 521 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 IFT43Q96FT9 208 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 KCNK13Q9HB14 408 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 ABI2Q9NYB9 513 aaPredicted RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 MAGEA13PA6NCF6 341 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 TMEM189-UBE2V1I3L0A0 370 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 MSI1O43347 362 aaKnown RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 AP2A1O95782 977 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 CCNFP41002 786 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 NIPAL4Q0D2K0 466 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 THOC5Q13769 683 aaKnown RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 CCNJLQ8IV13 435 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 SCN4BQ8IWT1 228 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 STKLD1Q8NE28 680 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 ZSCAN18Q8TBC5 510 aaPredicted RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 URGCPQ8TCY9 931 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 APBB2Q92870 758 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 PGLYRP2Q96PD5 576 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 TSEN34Q9BSV6 310 aaKnown RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 TRIM4Q9C037 500 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 ZCWPW1Q9H0M4 648 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 NMUR1Q9HB89 426 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 GPBP1L1Q9HC44 474 aaPredicted RBP17.74■□□□□ 0.43
RRP1-202ENST00000471909 NUDT5Q9UKK9 219 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 PTPRDP23468 1912 aa17.74■□□□□ 0.43
RRP1-202ENST00000471909 MTSS1O43312 755 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 DLDP09622 509 aaKnown RBP17.73■□□□□ 0.43
RRP1-202ENST00000471909 PGM1P36871 562 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 TEX44Q53QW1 395 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 KCTD11Q693B1 232 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 RWDD4Q6NW29 188 aaKnown RBP17.73■□□□□ 0.43
RRP1-202ENST00000471909 ZNF184Q99676 751 aaPredicted RBP17.73■□□□□ 0.43
RRP1-202ENST00000471909 SLC13A1Q9BZW2 595 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 GBA3Q9H227 469 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 SMOC2Q9H3U7 446 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 STARD7Q9NQZ5 370 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 PLLPQ9Y342 182 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 CYP2C18P33260 490 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 SERPINB4P48594 390 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 SERPINB9P50453 376 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 ARTNQ5T4W7 220 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 SDHAF4Q5VUM1 108 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 CES3Q6UWW8 571 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 MARK2Q7KZI7 788 aaKnown RBP17.73■□□□□ 0.43
RRP1-202ENST00000471909 PXYLP1Q8TE99 480 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 HAPLN3Q96S86 360 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 NAT9Q9BTE0 207 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 MLPHQ9BV36 600 aaPredicted RBP17.73■□□□□ 0.43
RRP1-202ENST00000471909 IQCGQ9H095 443 aaKnown RBP17.73■□□□□ 0.43
RRP1-202ENST00000471909 TRHDEQ9UKU6 1024 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 FRMPD3Q5JV73 1810 aa17.73■□□□□ 0.43
RRP1-202ENST00000471909 FCHO1O14526 889 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 PAGE1O75459 146 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 INHAP05111 366 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 MYL2P10916 166 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 BRMS1LQ5PSV4 323 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 TTC7BQ86TV6 843 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.72■□□□□ 0.43
RRP1-202ENST00000471909 PHC3Q8NDX5 983 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 OSER1Q9NX31 292 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 MKS1Q9NXB0 559 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 IL1RAPL1Q9NZN1 696 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 A0A1W2PQH9 124 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 JCHAINP01591 159 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 NFKB1P19838 968 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 BGNP21810 368 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 CCR1P32246 355 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 POLE2P56282 527 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 SMAD1Q15797 465 aaKnown RBP17.72■□□□□ 0.43
RRP1-202ENST00000471909 TEKT5Q96M29 485 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 PCMTD2Q9NV79 361 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 ANGPTL2Q9UKU9 493 aa17.72■□□□□ 0.43
RRP1-202ENST00000471909 C2orf71A6NGG8 1288 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 GPR15P49685 360 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 DDR2Q16832 855 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 DEFB115Q30KQ5 88 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 TIFABQ6ZNK6 161 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 ARHGAP36Q6ZRI8 547 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 DCP1BQ8IZD4 617 aaKnown RBP17.71■□□□□ 0.43
RRP1-202ENST00000471909 NDUFAF2Q8N183 169 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 GATA6Q92908 595 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 FCRL2Q96LA5 508 aaPredicted RBP17.71■□□□□ 0.43
RRP1-202ENST00000471909 FAM161BQ96MY7 647 aa17.71■□□□□ 0.43
RRP1-202ENST00000471909 FCRL3Q96P31 734 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms