RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 DRGXA6NNA5 263 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 TBC1D3LB9A6J9 549 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 SART1O43290 800 aaKnown RBP8.3□□□□□ -1.08
USP48-207ENST00000471752 ATP9BO43861 1147 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 HSF2BPO75031 334 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 SRGAP2O75044 1071 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 DAB1O75553 588 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 CD160O95971 181 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ASLP04424 464 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 TBC1D3HP0C7X1 549 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 SRCP12931 536 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 GOT1P17174 413 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ABCB4P21439 1286 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 GKP32189 559 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 CCR1P32246 355 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 NOS2P35228 1153 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 KRT9P35527 623 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 GABRB2P47870 512 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 SULT1E1P49888 294 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ADPRHP54922 357 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 PTK2Q05397 1052 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ZBTB16Q05516 673 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 CAMK2BQ13554 666 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 MEA1Q16626 185 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 C15orf59Q2T9L4 293 aaPredicted RBP8.3□□□□□ -1.08
USP48-207ENST00000471752 C5orf22Q49AR2 442 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ACCSLQ4AC99 568 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 AGBL4Q5VU57 503 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 TBC1D3GQ6DHY5 549 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 TBC1D3CQ6IPX1 549 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 DHRS13Q6UX07 377 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 USP30Q70CQ3 517 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 BNIPLQ7Z465 357 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 FAM131BQ86XD5 332 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 TBC1D3Q8IZP1 549 aaPredicted RBP8.3□□□□□ -1.08
USP48-207ENST00000471752 JOSD2Q8TAC2 188 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 CFAP57Q96MR6 1250 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 NOX5Q96PH1 765 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 MYOCQ99972 504 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 DDX50Q9BQ39 737 aaKnown RBP8.3□□□□□ -1.08
USP48-207ENST00000471752 ZDHHC5Q9C0B5 715 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 GANQ9H2C0 597 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 OSGEPQ9NPF4 335 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 FZD3Q9NPG1 666 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ASNSD1Q9NWL6 643 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 ARHGEF38Q9NXL2 777 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP48-207ENST00000471752 TMEM59LQ9UK28 342 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 NOCTQ9UK39 431 aaKnown RBP8.3□□□□□ -1.08
USP48-207ENST00000471752 TBC1D30Q9Y2I9 924 aa8.3□□□□□ -1.08
USP48-207ENST00000471752 SETXQ7Z333 2677 aaKnown RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 HELZ2Q9BYK8 2649 aaKnown RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 A0A1B0GTQ1 180 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 PES1O00541 588 aaKnown RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 VILLO15195 856 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 SDC3O75056 442 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ZMPSTE24O75844 475 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 GFPT2O94808 682 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 FGFR1OPO95684 399 aaKnown RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 GLI1P08151 1106 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ZNF883P0CG24 379 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 UCHL3P15374 230 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 PRLRP16471 622 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ZNF18P17022 549 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ITIH2P19823 946 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 CDH5P33151 784 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 ACVRL1P37023 503 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 GRIA4P48058 902 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 RACK1P63244 317 aaKnown RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 ATP11AP98196 1134 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 FMO1Q01740 532 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 PTP4A2Q12974 167 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ZNF177Q13360 481 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 KRT31Q15323 416 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 TPD52L1Q16890 204 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 TTC31Q49AM3 519 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 TCP11X2Q5H9J9 407 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 TPRG1LQ5T0D9 272 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 FAM102AQ5T9C2 384 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 PIP5KL1Q5T9C9 394 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 NAA35Q5VZE5 725 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 NYAP1Q6ZVC0 841 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 KANSL1Q7Z3B3 1105 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 GLRX5Q86SX6 157 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ERICH1Q86X53 443 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 PYROXD2Q8N2H3 581 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 SH2D3CQ8N5H7 860 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 EID2Q8N6I1 236 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 KDM1BQ8NB78 822 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 ZNF397Q8NF99 534 aaPredicted RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 OR2A12Q8NGT7 310 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 OR2T34Q8NGX1 318 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 PIP4K2CQ8TBX8 421 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 SAP25Q8TEE9 199 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 FUBP1Q96AE4 644 aaKnown RBP8.29□□□□□ -1.08
USP48-207ENST00000471752 FAM131CQ96AQ9 280 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 C18orf8Q96DM3 657 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 SERAC1Q96JX3 654 aa8.29□□□□□ -1.08
USP48-207ENST00000471752 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms