RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 MYL4P12829 197 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ERCC2P18074 760 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 IBSPP21815 317 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 EPHB2P29323 1055 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TYK2P29597 1187 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 MLH1P40692 756 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 KPNA2P52292 529 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 HK2P52789 917 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ATXN1P54253 815 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 PRKAA2P54646 552 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 CSE1LP55060 971 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 TSPY1Q01534 308 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 PPIDQ08752 370 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 BST1Q10588 318 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 UGP2Q16851 508 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 MFSD14CQ5VZR4 134 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ZNF385CQ66K41 422 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 SH2D5Q6ZV89 423 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 LCA5Q86VQ0 697 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 OSTM1Q86WC4 334 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TMPRSS6Q8IU80 811 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TNS4Q8IZW8 715 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ZNF567Q8N184 647 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 PYROXD2Q8N2H3 581 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TEX9Q8N6V9 391 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMC4-212ENST00000470240 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 NSMCE1Q8WV22 266 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 N4BP2L2Q92802 583 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 ZNF669Q96BR6 464 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 HDAC11Q96DB2 347 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 UROC1Q96N76 676 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 IL22Q9GZX6 179 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 GBA3Q9H227 469 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 CRISPLD1Q9H336 500 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 PRDM12Q9H4Q4 367 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 CATSPERBQ9H7T0 1116 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TLE6Q9H808 572 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 GOLGA2P5Q9HBQ8 144 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 DMAP1Q9NPF5 467 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 DONSONQ9NYP3 566 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TAGLN3Q9UI15 199 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ANGPTL2Q9UKU9 493 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 VANGL2Q9ULK5 521 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ZNF232Q9UNY5 417 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 APOBEC2Q9Y235 224 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 AAR2Q9Y312 384 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 HBS1LQ9Y450 684 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 NME7Q9Y5B8 376 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 CDY2AQ9Y6F7 541 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 CDY1Q9Y6F8 540 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 RPS6KL1Q9Y6S9 549 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 FAM237BA0A1B0GVD1 139 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ARHGAP42A6NI28 874 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 TMEM114B3SHH9 223 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 CLDN5O00501 218 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 TPP1O14773 563 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 DCLK1O15075 740 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 FGF10O15520 208 aaPredicted RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 HCRTO43612 131 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 DIAPH2O60879 1101 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 DUSP11O75319 330 aaKnown RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 ANXA9O76027 345 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 USP1O94782 785 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 SERPINA6P08185 405 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 C6orf222P0C671 652 aaPredicted RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 PAMP19021 973 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 CYP2B6P20813 491 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 PTPN3P26045 913 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 PGM1P36871 562 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 CCNG1P51959 295 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 AQP5P55064 265 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 PURAQ00577 322 aaKnown RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 BEX3Q00994 111 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 OCRLQ01968 901 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 GALNT2Q10471 571 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 CDH17Q12864 832 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ILF2Q12905 390 aaKnown RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 NAA25Q14CX7 972 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 TAF11Q15544 211 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 FSCBQ5H9T9 825 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 BRMS1LQ5PSV4 323 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 PRAMEF19Q5SWL8 479 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ZNF618Q5T7W0 954 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 N4BP2L1Q5TBK1 243 aaPredicted RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 ARMC3Q5W041 872 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 TIGD7Q6NT04 549 aaPredicted RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
SMC4-212ENST00000470240 FIGNL1Q6PIW4 674 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 C4orf50Q6ZRC1 276 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 SCML4Q8N228 414 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 MPP5Q8N3R9 675 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ZNF276Q8N554 614 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ATPAF2Q8N5M1 289 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 LZTR1Q8N653 840 aa8.16□□□□□ -1.1
SMC4-212ENST00000470240 ENDOVQ8N8Q3 282 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms