RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 DFFAO00273 331 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 KCNK3O14649 394 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 APOL1O14791 398 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 CST8O60676 142 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 CD160O95971 181 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 DCNP07585 359 aaKnown RBP15.13■□□□□ 0.01
COL9A3-209ENST00000469852 PECAM1P16284 738 aaPredicted RBP15.13■□□□□ 0.01
COL9A3-209ENST00000469852 POLR2EP19388 210 aaKnown RBP15.13■□□□□ 0.01
COL9A3-209ENST00000469852 CXCR5P32302 372 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 PTPN7P35236 360 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 NDST2P52849 883 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 COPS2P61201 443 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 ARF5P84085 180 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 SERINC3Q13530 473 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 C2orf27AQ580R0 203 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 IL31Q6EBC2 164 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 LINGO4Q6UY18 593 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 DCAF4L2Q8NA75 395 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 USP33Q8TEY7 942 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 HAUS1Q96CS2 278 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 RPL10LQ96L21 214 aaKnown RBP15.13■□□□□ 0.01
COL9A3-209ENST00000469852 OSBPL8Q9BZF1 889 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 C2orf42Q9NWW7 574 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 DTLQ9NZJ0 730 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 MRPS17Q9Y2R5 130 aaKnown RBP15.13■□□□□ 0.01
COL9A3-209ENST00000469852 STARD13Q9Y3M8 1113 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 SHROOM3Q8TF72 1996 aa15.13■□□□□ 0.01
COL9A3-209ENST00000469852 WASH3PC4AMC7 463 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 J3KR12 359 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 CBX4O00257 560 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 MT-CO1P00395 513 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 WASP42768 502 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 OXCT1P55809 520 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 YBEYP58557 167 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 DMC1Q14565 340 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF234Q14588 700 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 EIF4HQ15056 248 aaKnown RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 PARP15Q460N3 678 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 PREPLQ4J6C6 727 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 FAM182AQ5T1J6 154 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 BBS12Q6ZW61 710 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 B4GALNT4Q76KP1 1039 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 ALLCQ8N6M5 410 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF366Q8N895 744 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF513Q8N8E2 541 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 IL17RCQ8NAC3 791 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 RPLP0P6Q8NHW5 317 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 EXOC4Q96A65 974 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 CLDN23Q96B33 292 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 ERLEC1Q96DZ1 483 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 MAK16Q9BXY0 300 aaKnown RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 CACNA2D2Q9NY47 1150 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 DLGAP2Q9P1A6 1054 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 THAP10Q9P2Z0 257 aaPredicted RBP15.12■□□□□ 0.01
COL9A3-209ENST00000469852 SLCO3A1Q9UIG8 710 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 ERVW-1Q9UQF0 538 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 SIT1Q9Y3P8 196 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 HEY1Q9Y5J3 304 aa15.12■□□□□ 0.01
COL9A3-209ENST00000469852 K7ERQ8 282 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 SMAD6O43541 496 aaKnown RBP15.11■□□□□ 0.01
COL9A3-209ENST00000469852 KDELR3O43731 214 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 KLF8O95600 359 aaPredicted RBP15.11■□□□□ 0.01
COL9A3-209ENST00000469852 DLDP09622 509 aaKnown RBP15.11■□□□□ 0.01
COL9A3-209ENST00000469852 HLA-EP13747 358 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 HNRNPLP14866 589 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL9A3-209ENST00000469852 AOC1P19801 751 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 SERPINB6P35237 376 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 IL12RB1P42701 662 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 ECT2LQ008S8 904 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 DGKKQ5KSL6 1271 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF354CQ86Y25 554 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 LZTR1Q8N653 840 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 NELL2Q99435 816 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 FAM118BQ9BPY3 351 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 C2orf49Q9BVC5 232 aaPredicted RBP15.11■□□□□ 0.01
COL9A3-209ENST00000469852 OSBPL6Q9BZF3 934 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 CARD9Q9H257 536 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 MTG2Q9H4K7 406 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 PDFQ9HBH1 243 aa15.11■□□□□ 0.01
COL9A3-209ENST00000469852 ZDBF2Q9HCK1 2354 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 ARHGAP42A6NI28 874 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 TTC34A8MYJ7 566 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 SGK1O00141 431 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 MAFKO60675 156 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 PRAMEF11O60813 436 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 ADAM23O75077 832 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 ATP5BP06576 529 aaKnown RBP15.1■□□□□ 0.01
COL9A3-209ENST00000469852 SRCP12931 536 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 VAV1P15498 845 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 PRKCHP24723 683 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 DEKP35659 375 aaKnown RBP15.1■□□□□ 0.01
COL9A3-209ENST00000469852 GALNT2Q10471 571 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 KLF1Q13351 362 aaPredicted RBP15.1■□□□□ 0.01
COL9A3-209ENST00000469852 TFDP2Q14188 446 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 LRRC32Q14392 662 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 FBXO43Q4G163 708 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 SEL1L2Q5TEA6 688 aa15.1■□□□□ 0.01
COL9A3-209ENST00000469852 NUDT18Q6ZVK8 323 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms