RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 LOC100653049A0A140TA62 436 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 FCHO1O14526 889 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ZMPSTE24O75844 475 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 KRT34O76011 436 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ITGA2BP08514 1039 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 PRKCHP24723 683 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 LRPAP1P30533 357 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 LHX1P48742 406 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 CTBP1Q13363 440 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ITGA9Q13797 1035 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 LPIN1Q14693 890 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 PRKD1Q15139 912 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 XKR4Q5GH76 650 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 BTBD8Q5XKL5 378 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 METTL23Q86XA0 190 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 C10orf107Q8IVU9 208 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SHKBP1Q8TBC3 707 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 CASP10Q92851 521 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SLC7A6OSQ96CW6 309 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 KLHL5Q96PQ7 755 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 NMUR1Q9HB89 426 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 TXLNGQ9NUQ3 528 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SLC38A7Q9NVC3 462 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 FBXW11Q9UKB1 542 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 PACSIN3Q9UKS6 424 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 FIS1Q9Y3D6 152 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ANKRD12Q6UB98 2062 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 DCLK1O15075 740 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 GPR182O15218 404 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 GM2AP17900 193 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 CALB2P22676 271 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 NMBRP28336 390 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ETFBP38117 255 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SLC18A2Q05940 514 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 DPYSQ14117 519 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ARL13BQ3SXY8 428 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ATG14Q6ZNE5 492 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ASRGL1Q7L266 308 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 CDKL2Q92772 493 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ALKBH8Q96BT7 664 aaKnown RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 ZNF419Q96HQ0 510 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 MIPEPQ99797 713 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 FERMT1Q9BQL6 677 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 MLPHQ9BV36 600 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 RNPEPL1Q9HAU8 725 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 PNPOQ9NVS9 261 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 RNF186Q9NXI6 227 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SLC39A10Q9ULF5 831 aa9.62□□□□□ -0.87
TOP3A-203ENST00000469739 FNDC3AQ9Y2H6 1198 aaKnown RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 MTO1Q9Y2Z2 717 aaKnown RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 KIAA0100Q14667 2235 aaKnown RBP9.62□□□□□ -0.87
TOP3A-203ENST00000469739 FAM159BA6NKW6 160 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DDHD2O94830 711 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 SLC4A1P02730 911 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 POLBP06746 335 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DLDP09622 509 aaKnown RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 ESRRAP11474 423 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 ODC1P11926 461 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 PCSK1P29120 753 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 SLC5A3P53794 718 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 RASA2Q15283 850 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 C14orf80Q86SX3 495 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 SERINC5Q86VE9 423 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 MYLK4Q86YV6 388 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 RNF135Q8IUD6 432 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 SPATA2LQ8IUW3 424 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 WDR75Q8IWA0 830 aaKnown RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DCLK2Q8N568 766 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 FAM13CQ8NE31 585 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 MCUQ8NE86 351 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 CERS2Q96G23 380 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 FTHL17Q9BXU8 183 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DNAI2Q9GZS0 605 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 BFARQ9NZS9 450 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DNAJC16Q9Y2G8 782 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 GOLGA8QA0A0J9YX86 632 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 GOLGA8OA6NCC3 632 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 GOLGA8NF8WBI6 632 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 PDLIM1O00151 329 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 NEMP1O14524 444 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 GYG2O15488 501 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 OPHN1O60890 802 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 PAGE1O75459 146 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 SPAG6O75602 509 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 GJB3O75712 270 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 TPSB2P20231 275 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 STX3Q13277 289 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 TPSAB1Q15661 275 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 PARP6Q2NL67 630 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 CMPK2Q5EBM0 449 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 MAMSTRQ6ZN01 415 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-203ENST00000469739 TREML1Q86YW5 311 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 DENND6AQ8IWF6 608 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 CNTD1Q8N815 330 aa9.61□□□□□ -0.87
TOP3A-203ENST00000469739 HIPK4Q8NE63 616 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms