RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 OGFRQ9NZT2 677 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 CLUHO75153 1309 aa8.46□□□□□ -1.06
BRCA1-208ENST00000468300 ALOX15BO15296 676 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 NCAM2O15394 837 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 LPXNO60711 386 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 TTC4O95801 387 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 C1QAP02745 245 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 GABRR2P28476 465 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 GCAP28676 217 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 ZNF33AQ06730 810 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 MTM1Q13496 603 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CCDC149Q6ZUS6 474 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CCDC91Q7Z6B0 441 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 TFAP2DQ7Z6R9 452 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 PCGF5Q86SE9 256 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 ITIH5Q86UX2 942 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CFAP52Q8N1V2 620 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 SHKBP1Q8TBC3 707 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 MAML1Q92585 1016 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 MTIF3Q9H2K0 278 aaKnown RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CATSPERBQ9H7T0 1116 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CERS4Q9HA82 394 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 NUP210Q8TEM1 1887 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 MYO18AQ92614 2054 aaKnown RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 A0A1W2PRU2 124 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 TRDMT1O14717 391 aaKnown RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CCNCP24863 283 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 BASP1P80723 227 aaKnown RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 SLC7A9P82251 487 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 OLIG2Q13516 323 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 SLMAPQ14BN4 828 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 KYNUQ16719 465 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 HP1BP3Q5SSJ5 553 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 LRIG3Q6UXM1 1119 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 TADA2BQ86TJ2 420 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CCDC13Q8IYE1 715 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 CCNYQ8ND76 341 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 UBLCP1Q8WVY7 318 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 HMCESQ96FZ2 354 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 SERPINB12Q96P63 405 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 IL12RB2Q99665 862 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 MLPHQ9BV36 600 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 IGSF9Q9P2J2 1179 aa8.45□□□□□ -1.06
BRCA1-208ENST00000468300 MTRF1LQ9UGC7 380 aaKnown RBP8.45□□□□□ -1.06
BRCA1-208ENST00000468300 J3KR12 359 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TPPPO94811 219 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 PSMB4P28070 264 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 HOXA9P31269 272 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 SERPINB6P35237 376 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 NDST2P52849 883 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 IFI35P80217 286 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TNK2Q07912 1038 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 GPM6BQ13491 265 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TEX44Q53QW1 395 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TNFAIP8L3Q5GJ75 292 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 AP1ARQ63HQ0 302 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 RNF43Q68DV7 783 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TRMT10CQ7L0Y3 403 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CCDC25Q86WR0 208 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 LGI2Q8N0V4 545 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 FATE1Q969F0 183 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 C9orf72Q96LT7 481 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 FOXP3Q9BZS1 431 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 BRD8Q9H0E9 1235 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 NKX2-4Q9H2Z4 354 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 PDFQ9HBH1 243 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 SMPD4Q9NXE4 827 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 EURLQ9NYK6 297 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CCL26Q9Y258 94 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 HCFC2Q9Y5Z7 792 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TEX264Q9Y6I9 313 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 ZFP37Q9Y6Q3 630 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 F5H423 210 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 DFFAO00273 331 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 OPHN1O60890 802 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 LRG1P02750 347 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TPSB2P20231 275 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 MAGEA4P43358 317 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 RPS24P62847 133 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 COG7P83436 770 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TPSAB1Q15661 275 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 RTL10Q7L3V2 364 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 LZTR1Q8N653 840 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 MAB21L3Q8N8X9 362 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 FLCNQ8NFG4 579 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 TEKT5Q96M29 485 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CORO1BQ9BR76 489 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 SMG9Q9H0W8 520 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 ETAA1Q9NY74 926 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 PCDHGA4Q9Y5G9 962 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 CPQQ9Y646 472 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 KIF26AQ9ULI4 1882 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 A0A0D9SEW6 157 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 SCAMP3O14828 347 aaKnown RBP8.44□□□□□ -1.06
BRCA1-208ENST00000468300 MATN3O15232 486 aa8.44□□□□□ -1.06
BRCA1-208ENST00000468300 IRF1P10914 325 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms