RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TBC1D30Q9Y2I9 924 aa7.03□□□□□ -1.28
SCAF4-204ENST00000467731 DFFAO00273 331 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 ARNTLO00327 626 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 MCF2LO15068 1137 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 RAMP2O60895 175 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 SNUPNO95149 360 aaKnown RBP7.02□□□□□ -1.28
SCAF4-204ENST00000467731 ADH1CP00326 375 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 C2orf54Q08AI8 447 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 SNX1Q13596 522 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 RUNX3Q13761 415 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 PDGFRLQ15198 375 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 KCTD19Q17RG1 926 aaPredicted RBP7.02□□□□□ -1.28
SCAF4-204ENST00000467731 C6orf118Q5T5N4 469 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF572Q7Z3I7 529 aaPredicted RBP7.02□□□□□ -1.28
SCAF4-204ENST00000467731 SETD3Q86TU7 594 aaPredicted RBP7.02□□□□□ -1.28
SCAF4-204ENST00000467731 TTC8Q8TAM2 541 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 LGMNQ99538 433 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 DDX47Q9H0S4 455 aaKnown RBP7.02□□□□□ -1.28
SCAF4-204ENST00000467731 LRRC19Q9H756 370 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 BRD9Q9H8M2 597 aa7.02□□□□□ -1.28
SCAF4-204ENST00000467731 RASA4BC9J798 803 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 TRIM24O15164 1050 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 RASA4O43374 803 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 LIASO43766 372 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 PHF2O75151 1096 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 RHOCP08134 193 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 RBP3P10745 1247 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 MZF1P28698 734 aaPredicted RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 HLA-FP30511 346 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ACVRL1P37023 503 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 GARSP41250 739 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 KCNJ1P48048 391 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 NDST2P52849 883 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CORO7P57737 925 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 EIF3EP60228 445 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 GAD2Q05329 585 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 BYSLQ13895 437 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CRYMQ14894 314 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 POLD3Q15054 466 aaPredicted RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CCNG2Q16589 344 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CYP1B1Q16678 543 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 AFMIDQ63HM1 303 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC137Q6PK04 289 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ARHGAP36Q6ZRI8 547 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 BZW1Q7L1Q6 419 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 C12orf40Q86WS4 652 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC117Q8IWD4 279 aaPredicted RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 RBM12BQ8IXT5 1001 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CEP112Q8N8E3 955 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 LRRN4CLQ8ND94 238 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 OR7D4Q8NG98 312 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 FIBINQ8TAL6 211 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 MAGOHBQ96A72 148 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 HMCESQ96FZ2 354 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 C10orf88Q9H8K7 445 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 PSD3Q9NYI0 1048 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 COL4A2P08572 1712 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ILVBLA1L0T0 632 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CTAGE15A4D2H0 777 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 HOXC11O43248 304 aaPredicted RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CTAGE8P0CG41 777 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CD70P32970 193 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CSKP41240 450 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 PAPOLAP51003 745 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 GNA12Q03113 381 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 GALNT2Q10471 571 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 LMAN2Q12907 356 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 PDK1Q15118 436 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 OASLQ15646 514 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 PARP15Q460N3 678 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 HSP90B2PQ58FF3 399 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 FAM182AQ5T1J6 154 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 HHATQ5VTY9 493 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 TTC27Q6P3X3 843 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CTAGE6Q86UF2 777 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ZNF354CQ86Y25 554 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CTAGE4Q8IX94 777 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 KLHL7Q8IXQ5 586 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 SLC44A3Q8N4M1 653 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CPA6Q8N4T0 437 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ATPAF2Q8N5M1 289 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 C12orf50Q8NA57 414 aaPredicted RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 CCNYQ8ND76 341 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 SLC35B2Q8TB61 432 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ARHGEF2Q92974 986 aaKnown RBP7.02□□□□□ -1.29
SCAF4-204ENST00000467731 NXPE3Q969Y0 559 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 AGAP3Q96P47 875 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 TMEM121Q9BTD3 319 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 MUC3BQ9H195 1237 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 HOMER3Q9NSC5 361 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 ABCB8Q9NUT2 735 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 IGSF9Q9P2J2 1179 aa7.02□□□□□ -1.29
SCAF4-204ENST00000467731 USP34Q70CQ2 3546 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 ARHGAP42A6NI28 874 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 LOC730098B7Z3J9 87 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 H7C0C1 242 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CCDC188H7C350 402 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 NCAM2O15394 837 aa7.01□□□□□ -1.29
SCAF4-204ENST00000467731 CACNG3O60359 315 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms