RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TKTL1P51854 596 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 MAPK10P53779 464 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 OXCT1P55809 520 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 TAS2R38P59533 333 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 RPS24P62847 133 aaKnown RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 FZD2Q14332 565 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 SGSM1Q2NKQ1 1148 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 ZNF284Q2VY69 593 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 FSCBQ5H9T9 825 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 PIGZQ86VD9 579 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 HORMAD1Q86X24 394 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 NELFCDQ8IXH7 590 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 APCDD1Q8J025 514 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 PLEKHO2Q8TD55 490 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 JPH3Q8WXH2 748 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 NDRG1Q92597 394 aaKnown RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 BOCQ9BWV1 1114 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 SLC12A9Q9BXP2 914 aa10.55□□□□□ -0.72
HDAC3-203ENST00000467533 IPO11Q9UI26 975 aaKnown RBP10.55□□□□□ -0.72
HDAC3-203ENST00000467533 A0A1W2PQ27 194 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 A0A1W2PQ64 194 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 A0A1W2PQC6 194 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 H3BQV1 296 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 TGFB1I1O43294 461 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 BNIP3LO60238 219 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 EXOC3O60645 756 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 LUC7L3O95232 432 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 C4BPAP04003 597 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 CCKBRP32239 447 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 ETV5P41161 510 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 STAT6P42226 847 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 SLC8A3P57103 927 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 RAB41Q5JT25 222 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 NUGGCQ68CJ6 796 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 ESRP1Q6NXG1 681 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 KYAT3Q6YP21 454 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 BHLHA9Q7RTU4 235 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 DTX1Q86Y01 620 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 TICAM1Q8IUC6 712 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 UNC45BQ8IWX7 931 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 CFAP52Q8N1V2 620 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 SDR16C5Q8N3Y7 309 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 TAF4BQ92750 862 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 USP7Q93009 1102 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 ZSCAN31Q96LW9 406 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 DDX50Q9BQ39 737 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 CPEB1Q9BZB8 566 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 ZNF768Q9H5H4 540 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 APOBEC3BQ9UH17 382 aaKnown RBP10.54□□□□□ -0.72
HDAC3-203ENST00000467533 PADI4Q9UM07 663 aa10.54□□□□□ -0.72
HDAC3-203ENST00000467533 SPTY2D1-AS1A0A0U1RR47 76 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 VPS4BO75351 444 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 PCDH8O95206 1070 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
HDAC3-203ENST00000467533 RPLP0P05388 317 aaKnown RBP10.53□□□□□ -0.72
HDAC3-203ENST00000467533 ANXA6P08133 673 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 COL8A1P27658 744 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 CD82P27701 267 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 DCTP40126 519 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 MLLT10P55197 1068 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 CCL7P80098 99 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 PDE1CQ14123 709 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-203ENST00000467533 FGL2Q14314 439 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 ACCSLQ4AC99 568 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 ZNF394Q53GI3 561 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 LACTB2Q53H82 288 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-203ENST00000467533 PIP5KL1Q5T9C9 394 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 BSPRYQ5W0U4 402 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 SEL1L3Q68CR1 1132 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 NADSYN1Q6IA69 706 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 NEK5Q6P3R8 708 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 CCDC73Q6ZRK6 1079 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 SRRM1Q8IYB3 904 aaKnown RBP10.53□□□□□ -0.72
HDAC3-203ENST00000467533 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 BTN2A2Q8WVV5 523 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 CCDC74AQ96AQ1 378 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 MYEOVQ96EZ4 313 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 CATSPER2Q96P56 530 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 IPO9Q96P70 1041 aaKnown RBP10.53□□□□□ -0.72
HDAC3-203ENST00000467533 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 GPR27Q9NS67 375 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 KLF15Q9UIH9 416 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 VPS4AQ9UN37 437 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 CELSR2Q9HCU4 2923 aa10.53□□□□□ -0.72
HDAC3-203ENST00000467533 POM121BA6NF01 834 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 C9orf172C9J069 976 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 STMND1H3BQB6 276 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ALOX15BO15296 676 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 IGLV3-27P01718 113 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 RPN1P04843 607 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 RNF224P0DH78 156 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 GNLYP22749 145 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 RABIFP47224 123 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ADKP55263 362 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 TBX4P57082 545 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ADIGQ0VDE8 80 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms