RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 FAF2Q96CS3 445 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 CFAP36Q96G28 342 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 CNPY3Q9BT09 278 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 MROH8Q9H579 483 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 STN1Q9H668 368 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 ASB7Q9H672 318 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 BCAP29Q9UHQ4 241 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 SIN3BO75182 1162 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 TSHRP16473 764 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 AKAP5P24588 427 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 TKTP29401 623 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 RBP5P82980 135 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 SMAD1Q15797 465 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 RGS21Q2M5E4 152 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 ZNF484Q5JVG2 852 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 MARCH8Q5T0T0 291 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 NANOGP8Q6NSW7 305 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 DENND5BQ6ZUT9 1274 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 SH2D5Q6ZV89 423 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 CLVS1Q8IUQ0 354 aaPredicted RBP18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 OLFM1Q99784 485 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 RSAD1Q9HA92 442 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 GJD2Q9UKL4 321 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 APOBEC2Q9Y235 224 aaKnown RBP18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 MYRFQ9Y2G1 1151 aa18.41■□□□□ 0.54
SNAPC3-205ENST00000467062 TCRBV9S1A1TA0A576 114 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 FAM47E-STBD1D6RA91 191 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 PCYT1AP49585 367 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 CDKL1Q00532 357 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 LAMC2Q13753 1193 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 OGFOD2Q6N063 350 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 NUDCD3Q8IVD9 361 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 WDR75Q8IWA0 830 aaKnown RBP18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 PLD5Q8N7P1 536 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 EBF4Q9BQW3 602 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 GCOM2Q9BZD3 368 aaPredicted RBP18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 KLK14Q9P0G3 267 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 DKK3Q9UBP4 350 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 PSMD12O00232 456 aaPredicted RBP18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 PFDN6O15212 129 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 SULT1C4O75897 302 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 BMP10O95393 424 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 INHBAP08476 426 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 P4HA1P13674 534 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 ITGAXP20702 1163 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 TNFAIP2Q03169 654 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 PPIL2Q13356 520 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 TEX44Q53QW1 395 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 ZNF618Q5T7W0 954 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 IL23RQ5VWK5 629 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 EGFLAMQ63HQ2 1017 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 GALNT4Q8N4A0 578 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 NDRG1Q92597 394 aaKnown RBP18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 CCDC138Q96M89 665 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 RNF157Q96PX1 679 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 DCUN1D5Q9BTE7 237 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 SIRPGQ9P1W8 387 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 EPS15L1Q9UBC2 864 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 RIMS3Q9UJD0 308 aa18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 CNOT11Q9UKZ1 510 aaKnown RBP18.4■□□□□ 0.54
SNAPC3-205ENST00000467062 ASB14A6NK59 587 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 APRTP07741 180 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 PTPN2P17706 415 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 FAAP100Q0VG06 881 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 NOMO1Q15155 1222 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 LCLAT1Q6UWP7 414 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 CTAGE3PQ8IX95 158 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 PQLC3Q8N755 202 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 LINC01465Q8N7H1 131 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 OR6B3Q8NGW1 331 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 PCDH19Q8TAB3 1148 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 HM13Q8TCT9 377 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 C12orf43Q96C57 262 aaKnown RBP18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 CYP3A43Q9HB55 503 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 NOX1Q9Y5S8 564 aa18.39■□□□□ 0.54
SNAPC3-205ENST00000467062 KAT6AQ92794 2004 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 H3BNH8 94 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 PAPSS1O43252 624 aaPredicted RBP18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 CCDC130P13994 396 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 HOXD11P31277 338 aaPredicted RBP18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 ATICP31939 592 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 GSSP48637 474 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 CCT8P50990 548 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 GRIK4Q16099 956 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 ZBED5Q49AG3 693 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 CHERPQ8IWX8 916 aaKnown RBP18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 MECRQ9BV79 373 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 PIH1D1Q9NWS0 290 aaKnown RBP18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 EBF1Q9UH73 591 aa18.39■□□□□ 0.53
SNAPC3-205ENST00000467062 LMO2P25791 158 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 ADORA2BP29275 332 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 BCAR1P56945 870 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 TXNL4AP83876 142 aaKnown RBP18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 MOGQ16653 247 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 FAM187BQ17R55 369 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 ARL13BQ3SXY8 428 aa18.38■□□□□ 0.53
SNAPC3-205ENST00000467062 RNF169Q8NCN4 708 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms