RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ADAMTS16Q8TE57 1224 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 AGAP3Q96P47 875 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 WRNIP1Q96S55 665 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 ARHGEF38Q9NXL2 777 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 GGA3Q9NZ52 723 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 ANKRD6Q9Y2G4 727 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 A0A087WXM4 84 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 KANSL1LA0AUZ9 987 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 TCAF2A6NFQ2 919 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 C9IYK1 514 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 H0YIN7 160 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 CABYRO75952 493 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 ITGB3P05106 788 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 PFKMP08237 780 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 CYP3A5P20815 502 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 MLH1P40692 756 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 CSE1LP55060 971 aaKnown RBP20.09■□□□□ 0.81
SDF4-205ENST00000465727 LAMTOR4Q0VGL1 99 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 ZBED5Q49AG3 693 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 FAM160B1Q5W0V3 765 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 DPH6Q7L8W6 267 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 LZTR1Q8N653 840 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 RNF149Q8NC42 400 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.09■□□□□ 0.815e-7■■■■□ 26.7
SDF4-205ENST00000465727 MTMR14Q8NCE2 650 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 TMA16Q96EY4 203 aaKnown RBP20.09■□□□□ 0.81
SDF4-205ENST00000465727 ZNF512Q96ME7 567 aaPredicted RBP20.09■□□□□ 0.81
SDF4-205ENST00000465727 ACE2Q9BYF1 805 aaPredicted RBP20.09■□□□□ 0.81
SDF4-205ENST00000465727 TBC1D23Q9NUY8 699 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 AP4E1Q9UPM8 1137 aa20.09■□□□□ 0.81
SDF4-205ENST00000465727 STX16-NPEPL1H3BU86 382 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 ACKR2O00590 384 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 PIGNO95427 931 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 LTFP02788 710 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 C2P06681 752 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 CXCL8P10145 99 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 MCF2P10911 925 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 VARSP26640 1264 aaKnown RBP20.08■□□□□ 0.81
SDF4-205ENST00000465727 HMOX2P30519 316 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 SLC7A1P30825 629 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 STT3AP46977 705 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 ENTPD1P49961 510 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 OSTNP61366 133 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 PPIL2Q13356 520 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 C16orf72Q14CZ0 275 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 GPR180Q86V85 440 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 EXOC8Q8IYI6 725 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 FIBCD1Q8N539 461 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 ISOC1Q96CN7 298 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 UNC93B1Q9H1C4 597 aa20.08■□□□□ 0.81
SDF4-205ENST00000465727 LIN28AQ9H9Z2 209 aaKnown RBP20.08■□□□□ 0.81
SDF4-205ENST00000465727 RCOR3Q9P2K3 495 aaPredicted RBP20.08■□□□□ 0.81
SDF4-205ENST00000465727 E2F8A0AVK6 867 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 RNF103O00237 685 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 CLASP2O75122 1294 aaKnown RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 ZNF189O75820 626 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 NFICP08651 508 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 MMP10P09238 476 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 GMPRP36959 345 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 GRIA4P48058 902 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 GLUD2P49448 558 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 STXBP2Q15833 593 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 ARL13AQ5H913 290 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 TMEM110Q86TL2 294 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 CXorf38Q8TB03 319 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 KHSRPQ92945 711 aaKnown RBP eCLIP20.07■□□□□ 0.8
SDF4-205ENST00000465727 WNK4Q96J92 1243 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TRPV6Q9H1D0 765 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 HIPK3Q9H422 1215 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 C20orf96Q9NUD7 363 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 ADA2Q9NZK5 511 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 COPG1Q9Y678 874 aaKnown RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 HTRA2O43464 458 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 DNAJB1P25685 340 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TTKP33981 857 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 STAT5BP51692 787 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 NDST1P52848 882 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 ATXN3P54252 364 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 PSME3P61289 254 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 IRF9Q00978 393 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 MAPRE2Q15555 327 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 PDCD4Q53EL6 469 aaKnown RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 BSPRYQ5W0U4 402 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 MAP1SQ66K74 1059 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 NXNQ6DKJ4 435 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TMEM135Q86UB9 458 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TERB1Q8NA31 727 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TNIP2Q8NFZ5 429 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 LRTOMTQ8WZ04 291 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 CENPIQ92674 756 aaPredicted RBP20.07■□□□□ 0.8
SDF4-205ENST00000465727 BORCS5Q969J3 196 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 FAM167AQ96KS9 214 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 TSNARE1Q96NA8 513 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 PCYT2Q99447 389 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 NT5C1AQ9BXI3 368 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 DNAI2Q9GZS0 605 aa20.07■□□□□ 0.8
SDF4-205ENST00000465727 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms