RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 RNF34Q969K3 372 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 HDAC11Q96DB2 347 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 PABPC5Q96DU9 382 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 PRICKLE1Q96MT3 831 aaPredicted RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 TSGA13Q96PP4 275 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 CORO1BQ9BR76 489 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 SIK2Q9H0K1 926 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 RAB17Q9H0T7 212 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 RETREG1Q9H6L5 497 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 ASAH2Q9NR71 780 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 FAM114A2Q9NRY5 505 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 TMEM248Q9NWD8 314 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 WHRNQ9P202 907 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 FAM153AQ9UHL3 310 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 AGO1Q9UL18 857 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 ZNF148Q9UQR1 794 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 UTP11Q9Y3A2 253 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 HEY1Q9Y5J3 304 aa9.05□□□□□ -0.96
UBA3-208ENST00000465627 CNOT1A5YKK6 2376 aaKnown RBP9.05□□□□□ -0.96
UBA3-208ENST00000465627 DENND4AQ7Z401 1863 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 GOLGA6L7A0A1B0GV03 622 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CFAP69A5D8W1 941 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 C5orf60A6NFR6 353 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 GCATO75600 419 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CNTN5O94779 1100 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CSPG5O95196 566 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 MAP3K6O95382 1288 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 FGF19O95750 216 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 GAS8O95995 478 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 MOCS2O96007 188 aaPredicted RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 PEX11BO96011 259 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 KRT14P02533 472 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 RHOP08100 348 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 HMBSP08397 361 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 TCF3P15923 654 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 GJA1P17302 382 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 TACR2P21452 398 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 DDX6P26196 483 aaKnown RBP eCLIP9.04□□□□□ -0.96
UBA3-208ENST00000465627 WEE1P30291 646 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CORO1AP31146 461 aaKnown RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 CA8P35219 290 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 RPL22P35268 128 aaKnown RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 NRIP1P48552 1158 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 NTHL1P78549 312 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 ZNF33AQ06730 810 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 PPIDQ08752 370 aaKnown RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 WASHC5Q12768 1159 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 HYAL1Q12794 435 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 COL19A1Q14993 1142 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 TAF12Q16514 161 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 TCEAL5Q5H9L2 206 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 RAP1GAP2Q684P5 730 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 HIBCHQ6NVY1 386 aaPredicted RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 HTR3DQ70Z44 454 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 B4GALNT4Q76KP1 1039 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 ZC3H18Q86VM9 953 aaKnown RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 LZTR1Q8N653 840 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CCDC89Q8N998 374 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 FAM71DQ8N9W8 422 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 LEMD2Q8NC56 503 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 NETO2Q8NC67 525 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 MRPS31Q92665 395 aaKnown RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 FATE1Q969F0 183 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 ZNF419Q96HQ0 510 aaPredicted RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 RIPOR3Q96MK2 946 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 LGMNQ99538 433 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CDCA3Q99618 268 aaPredicted RBP9.04□□□□□ -0.96
UBA3-208ENST00000465627 FAM129AQ9BZQ8 928 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 DPH5Q9H2P9 285 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 TLE6Q9H808 572 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 CLDND1Q9NY35 253 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 MPP6Q9NZW5 540 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 VANGL2Q9ULK5 521 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 NFU1Q9UMS0 254 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 ARHGAP26Q9UNA1 814 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 SNX24Q9Y343 169 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 FANCMQ8IYD8 2048 aa9.04□□□□□ -0.96
UBA3-208ENST00000465627 SHROOM3Q8TF72 1996 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 CCDC195A0A1B0GUA6 201 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 DNALI1O14645 258 aaPredicted RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 NCAM2O15394 837 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 MAFKO60675 156 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 SRGAP2BP0DMP2 458 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 MYL4P12829 197 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 HDCP19113 662 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 ITIH2P19823 946 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 GARSP41250 739 aaKnown RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 SGSHP51688 502 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 NDST2P52849 883 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 TNK2Q07912 1038 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 PDK1Q15118 436 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 TEAD2Q15562 447 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 TRIP13Q15645 432 aaPredicted RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 ADGRF1Q5T601 910 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 RNASEH2BQ5TBB1 312 aaKnown RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 EMBQ6PCB8 327 aa9.03□□□□□ -0.96
UBA3-208ENST00000465627 DARS2Q6PI48 645 aaKnown RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 BZW1Q7L1Q6 419 aaKnown RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 RBM23Q86U06 439 aaKnown RBP9.03□□□□□ -0.96
UBA3-208ENST00000465627 DENND1CQ8IV53 801 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms