RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMC4-205ENST00000465563 H1FNTQ75WM6 255 aaPredicted RBP5.5□□□□□ -1.53
SMC4-205ENST00000465563 ENDOVQ8N8Q3 282 aaKnown RBP5.5□□□□□ -1.53
SMC4-205ENST00000465563 C18orf8Q96DM3 657 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 TP63Q9H3D4 680 aaPredicted RBP5.5□□□□□ -1.53
SMC4-205ENST00000465563 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 ZDHHC7Q9NXF8 308 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 IGSF9Q9P2J2 1179 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 KCNG2Q9UJ96 466 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 PCDHGB2Q9Y5G2 931 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 OAZ1P54368 228 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 HLFQ16534 295 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 FAM171A1Q5VUB5 890 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 HEPHL1Q6MZM0 1159 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 FJX1Q86VR8 437 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 HORMAD2Q8N7B1 307 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 MUL1Q969V5 352 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 NPAS1Q99742 590 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 C1QTNF4Q9BXJ3 329 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 METTL14Q9HCE5 456 aaKnown RBP5.49□□□□□ -1.53
SMC4-205ENST00000465563 IL36RNQ9UBH0 155 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 SHROOM4Q9ULL8 1493 aa5.49□□□□□ -1.53
SMC4-205ENST00000465563 PLSCR5A0PG75 271 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 DDNO94850 711 aaPredicted RBP5.48□□□□□ -1.53
SMC4-205ENST00000465563 GNLYP22749 145 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 PPP3CCP48454 512 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 RCAN1P53805 252 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 POU3F1Q03052 451 aaPredicted RBP5.48□□□□□ -1.53
SMC4-205ENST00000465563 EEF1A2Q05639 463 aaKnown RBP5.48□□□□□ -1.53
SMC4-205ENST00000465563 HNF4GQ14541 408 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 FAM76BQ5HYJ3 339 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 GATAD2AQ86YP4 633 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 FAM216AQ8WUB2 273 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 HMGB4Q8WW32 186 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 CCDC138Q96M89 665 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 DUX5Q96PT3 197 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 LIN7CQ9NUP9 197 aaKnown RBP5.48□□□□□ -1.53
SMC4-205ENST00000465563 ERRFI1Q9UJM3 462 aaPredicted RBP5.48□□□□□ -1.53
SMC4-205ENST00000465563 CNTN6Q9UQ52 1028 aa5.48□□□□□ -1.53
SMC4-205ENST00000465563 ANO9A1A5B4 782 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 AGAP5A6NIR3 686 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 SLC16A5O15375 505 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 HLA-DQA2P01906 255 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 MYZAPP0CAP1 466 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 UNGP13051 313 aaPredicted RBP5.47□□□□□ -1.53
SMC4-205ENST00000465563 ZNF12P17014 697 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 AMTP48728 403 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 NUDT6P53370 316 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 C5orf22Q49AR2 442 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 TMPRSS12Q86WS5 348 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 SLC35F5Q8WV83 523 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 RSC1A1Q92681 617 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 RETREG1Q9H6L5 497 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 SLC25A13Q9UJS0 675 aa5.47□□□□□ -1.53
SMC4-205ENST00000465563 SRRM3A6NNA2 597 aaPredicted RBP5.46□□□□□ -1.54
SMC4-205ENST00000465563 LDB2O43679 373 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 ASNA1O43681 348 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 TMCC1O94876 653 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 PLGP00747 810 aaPredicted RBP5.46□□□□□ -1.54
SMC4-205ENST00000465563 PRPH2P23942 346 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 KIF19Q2TAC6 998 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 ZNF718Q3SXZ3 478 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 PALB2Q86YC2 1186 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 CEP76Q8TAP6 659 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 TMED6Q8WW62 240 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 KIAA1191Q96A73 305 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 DDX31Q9H8H2 851 aaKnown RBP5.46□□□□□ -1.54
SMC4-205ENST00000465563 Q9N2J8 555 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 PCDHA10Q9Y5I2 948 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 RAI2Q9Y5P3 530 aa5.46□□□□□ -1.54
SMC4-205ENST00000465563 LOC102724159A0A0B4J2E5 919 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 KCNJ13O60928 360 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 SOX30O94993 753 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 NAGAP17050 411 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 ITGB8P26012 769 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 PCP4P48539 62 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 PKP1Q13835 747 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 HLTFQ14527 1009 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMC4-205ENST00000465563 SLC39A14Q15043 492 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 PWP2Q15269 919 aaKnown RBP5.45□□□□□ -1.54
SMC4-205ENST00000465563 ZNF284Q2VY69 593 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 BTBD16Q32M84 506 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 TBRG1Q3YBR2 411 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 ZACNQ401N2 412 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 TRIM60Q495X7 471 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 ZNF672Q499Z4 452 aaPredicted RBP5.45□□□□□ -1.54
SMC4-205ENST00000465563 OTUD3Q5T2D3 398 aaPredicted RBP5.45□□□□□ -1.54
SMC4-205ENST00000465563 TCP11L2Q8N4U5 519 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 PARD3BQ8TEW8 1205 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 C8orf48Q96LL4 319 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 GFM1Q96RP9 751 aaKnown RBP5.45□□□□□ -1.54
SMC4-205ENST00000465563 FIZ1Q96SL8 496 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 HDHD5Q9BXW7 423 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 PDE11AQ9HCR9 933 aa5.45□□□□□ -1.54
SMC4-205ENST00000465563 SRPRBQ9Y5M8 271 aaKnown RBP5.45□□□□□ -1.54
SMC4-205ENST00000465563 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.44□□□□□ -1.54
SMC4-205ENST00000465563 FAM90A18PA6NE21 464 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 FAM90A16PA6NEW6 464 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 FAM90A9PA6NNJ1 464 aa5.44□□□□□ -1.54
SMC4-205ENST00000465563 FAM90A5PA8MXJ8 464 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms