RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LMX1AQ8TE12 382 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 JPH3Q8WXH2 748 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 DHX58Q96C10 678 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 SPAG5Q96R06 1193 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 DUSP23Q9BVJ7 150 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 TNMDQ9H2S6 317 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 TCEAL2Q9H3H9 227 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 PISDQ9UG56 409 aa15.41■□□□□ 0.06
HDAC6-214ENST00000465269 ZFR2Q9UPR6 939 aaKnown RBP15.41■□□□□ 0.06
HDAC6-214ENST00000465269 IRAK2O43187 625 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 SLC7A4O43246 635 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 GABBR2O75899 941 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 SFTPCP11686 197 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 LCP1P13796 627 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 PDGFRAP16234 1089 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 AKT2P31751 481 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 TBX4P57082 545 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 HNRNPKP61978 463 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC6-214ENST00000465269 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
HDAC6-214ENST00000465269 C1orf61Q13536 156 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 NR0B2Q15466 257 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 ACCSLQ4AC99 568 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 MS4A13Q5J8X5 152 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 MANEAQ5SRI9 462 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 Q6ZVU0 165 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 RAB11FIP2Q7L804 512 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 ABI3BPQ7Z7G0 1075 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 RBFAQ8N0V3 343 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 ANKRD52Q8NB46 1076 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 CLEC4CQ8WTT0 213 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 OR8D1Q8WZ84 308 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 GRAMD1AQ96CP6 724 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 BMFQ96LC9 184 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 CCDC3Q9BQI4 270 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 UBXN6Q9BZV1 441 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 LRRC4Q9HBW1 653 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 LRRC4CQ9HCJ2 640 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 EVA1BQ9NVM1 165 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 DMAC2Q9NW81 257 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 RABGEF1Q9UJ41 708 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 PPM1HQ9ULR3 514 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 SMC3Q9UQE7 1217 aa15.4■□□□□ 0.06
HDAC6-214ENST00000465269 PRRC2CQ9Y520 2896 aaKnown RBP15.39■□□□□ 0.05
HDAC6-214ENST00000465269 RAD51BO15315 384 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 AQP9O43315 295 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 TCEA3O75764 348 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 KRT38O76015 456 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 MOCS3O95396 460 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 CTSLP07711 333 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 ITIH1P19827 911 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 HNRNPA2B1P22626 353 aaKnown RBP15.39■□□□□ 0.05
HDAC6-214ENST00000465269 RGS7P49802 495 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 INHBCP55103 352 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 MAPK8IP2Q13387 824 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-214ENST00000465269 SPIDRQ14159 915 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 TCEA2Q15560 299 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 CEP135Q66GS9 1140 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 HORMAD1Q86X24 394 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 LGI2Q8N0V4 545 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 FCRL2Q96LA5 508 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-214ENST00000465269 PREBQ9HCU5 417 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 PCDHGA7Q9Y5G6 932 aa15.39■□□□□ 0.05
HDAC6-214ENST00000465269 PRAMEF33A0A0G2JMD5 474 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ENO4A6NNW6 628 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 SPTLC2O15270 562 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 SPINT1O43278 529 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 PRAMEF10O60809 474 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 GCATO75600 419 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 CSF2P04141 144 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 LIPCP11150 499 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 NME1P15531 152 aaKnown RBP15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ZNF18P17022 549 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ETV5P41161 510 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 MLLT3P42568 568 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-214ENST00000465269 DAOAP59103 153 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 FGL2Q14314 439 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 NCAPHQ15003 741 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 RAP1GAP2Q684P5 730 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 NUGGCQ68CJ6 796 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ARHGAP17Q68EM7 881 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 MSANTD2Q6P1R3 559 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 UNC13DQ70J99 1090 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 UNC45BQ8IWX7 931 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 SIX6OS1Q8N1H7 587 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ZNF557Q8N988 423 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-214ENST00000465269 SEMA4DQ92854 862 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 LIN37Q96GY3 246 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ZNF71Q9NQZ8 489 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-214ENST00000465269 CISHQ9NSE2 258 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 ABCC13Q9NSE7 274 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 FOXJ2Q9P0K8 574 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 PLEKHB1Q9UF11 243 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-214ENST00000465269 TSPAN16Q9UKR8 245 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 SCN8AQ9UQD0 1980 aa15.38■□□□□ 0.05
HDAC6-214ENST00000465269 TYW5A2RUC4 315 aaKnown RBP15.37■□□□□ 0.05
HDAC6-214ENST00000465269 XPO1O14980 1071 aaKnown RBP15.37■□□□□ 0.05
HDAC6-214ENST00000465269 PCDH8O95206 1070 aa15.37■□□□□ 0.05
HDAC6-214ENST00000465269 JUNDP17535 347 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms