RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 K7ERQ8 282 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 SMAD6O43541 496 aaKnown RBP18.11■□□□□ 0.49
VPS52-214ENST00000463486 RARAP10276 462 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 SRCP12931 536 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 HCAR3P49019 387 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 ARF5P84085 180 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 LAIR1Q6GTX8 287 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 CEP68Q76N32 757 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 CCDC170Q8IYT3 715 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 UMODL1-AS1Q8N2C9 162 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 DCLK2Q8N568 766 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 FAM71BQ8TC56 605 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 SIPA1Q96FS4 1042 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 MAGEH1Q9H213 219 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 FBRSQ9HAH7 460 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 CWC15Q9P013 229 aaKnown RBP18.11■□□□□ 0.49
VPS52-214ENST00000463486 GON4LQ3T8J9 2241 aa18.11■□□□□ 0.49
VPS52-214ENST00000463486 CXorf51AA0A1B0GTR3 108 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 FGF10O15520 208 aaPredicted RBP18.1■□□□□ 0.49
VPS52-214ENST00000463486 ZNF217O75362 1048 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 GOT1P17174 413 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 IL4RP24394 825 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 TPMTP51580 245 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 ARSEP51690 589 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 KRT83P78385 493 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 DPYSQ14117 519 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 DLG2Q15700 870 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 AFMIDQ63HM1 303 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 PMS2CLQ68D20 193 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 LINGO4Q6UY18 593 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 RAD9BQ6WBX8 426 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 RFX8Q6ZV50 586 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 TEKT4Q8WW24 435 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 TSC1Q92574 1164 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 RUBCNQ92622 972 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 VOPP1Q96AW1 172 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 SPON2Q9BUD6 331 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 LRRC19Q9H756 370 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 IMPACTQ9P2X3 320 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 CYP8B1Q9UNU6 501 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 TFR2Q9UP52 801 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 REXO2Q9Y3B8 237 aaKnown RBP18.1■□□□□ 0.49
VPS52-214ENST00000463486 ACTL7AQ9Y615 435 aa18.1■□□□□ 0.49
VPS52-214ENST00000463486 LAMA1P25391 3075 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 DMXL1Q9Y485 3027 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 SOWAHDA6NJG2 315 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 CBX4O00257 560 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 EEF2KO00418 725 aaKnown RBP18.09■□□□□ 0.49
VPS52-214ENST00000463486 RETP07949 1114 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 MAGEA1P43355 309 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 TAS2R40P59535 323 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 TPI1P60174 286 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 ZBTB16Q05516 673 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 SMTNL2Q2TAL5 461 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 ATP13A4Q4VNC1 1196 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 KIAA1324Q6UXG2 1013 aaKnown RBP18.09■□□□□ 0.49
VPS52-214ENST00000463486 POLNQ7Z5Q5 900 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 TMTC1Q8IUR5 882 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 RFFLQ8WZ73 363 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 PRCCQ92733 491 aaPredicted RBP18.09■□□□□ 0.49
VPS52-214ENST00000463486 LOXL4Q96JB6 756 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 ZWILCHQ9H900 591 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 ATP13A1Q9HD20 1204 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 WSB2Q9NYS7 404 aaPredicted RBP18.09■□□□□ 0.49
VPS52-214ENST00000463486 SLC25A13Q9UJS0 675 aa18.09■□□□□ 0.49
VPS52-214ENST00000463486 EPN1Q9Y6I3 576 aaPredicted RBP18.09■□□□□ 0.49
VPS52-214ENST00000463486 CEP250Q9BV73 2442 aa18.08■□□□□ 0.49
VPS52-214ENST00000463486 C10orf142B7Z368 130 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 KDELR3O43731 214 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 RAMP2O60895 175 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 ERCC2P18074 760 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 MAN1A1P33908 653 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.48
VPS52-214ENST00000463486 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 BYSLQ13895 437 aaKnown RBP18.08■□□□□ 0.48
VPS52-214ENST00000463486 POLD3Q15054 466 aaPredicted RBP18.08■□□□□ 0.48
VPS52-214ENST00000463486 PPP6R3Q5H9R7 873 aaPredicted RBP18.08■□□□□ 0.48
VPS52-214ENST00000463486 C11orf74Q86VG3 221 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 ARHGAP12Q8IWW6 846 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 RHOT2Q8IXI1 618 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 STK40Q8N2I9 435 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 OR2A12Q8NGT7 310 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 CATSPERBQ9H7T0 1116 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 PCDH18Q9HCL0 1135 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 PARD6AQ9NPB6 346 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.08■□□□□ 0.48
VPS52-214ENST00000463486 PCDHA13Q9Y5I0 950 aa18.08■□□□□ 0.48
VPS52-214ENST00000463486 SPTBN4Q9H254 2564 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 NUMA1Q14980 2115 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 NUP205Q92621 2012 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 RCCD1A6NED2 376 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 RASA4BC9J798 803 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 RNF103O00237 685 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 MCF2LO15068 1137 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ZBTB24O43167 697 aaPredicted RBP18.07■□□□□ 0.48
VPS52-214ENST00000463486 RASA4O43374 803 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 EPN2O95208 641 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 NDUFA10O95299 355 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 ETFBP38117 255 aa18.07■□□□□ 0.48
VPS52-214ENST00000463486 NNMTP40261 264 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms