RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 GMPRP36959 345 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 PACS1Q6VY07 963 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 KDELC2Q7Z4H8 507 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 TMEM135Q86UB9 458 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 CCDC63Q8NA47 563 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 LRRC8CQ8TDW0 803 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 AZIN2Q96A70 460 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 CERS2Q96G23 380 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 BTN2A3PQ96KV6 586 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 RMDN2Q96LZ7 410 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 KLHL5Q96PQ7 755 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 AGAP2Q99490 1192 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 LRRC40Q9H9A6 602 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 GLOD4Q9HC38 313 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.32
VAPB-203ENST00000463370 BFARQ9NZS9 450 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 ZNF212Q9UDV6 495 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 FNDC1Q4ZHG4 1894 aaPredicted RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 IGLV3-10A0A075B6K4 115 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 CCT8L1PA6NM43 557 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 GOLGA8TH3BQL2 631 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 COPEO14579 308 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 GJB5O95377 273 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ALDOAP04075 364 aaKnown RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 RPL10AP62906 217 aaKnown RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 CNKSR3Q6P9H4 555 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 CCDC121Q6ZUS5 278 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 KLHDC8BQ8IXV7 354 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 IPMKQ8NFU5 416 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 AUTS2Q8WXX7 1259 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ATP2A3Q93084 1043 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 BEGAINQ9BUH8 593 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 MECRQ9BV79 373 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 TTC24A2A3L6 582 aaPredicted RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 ERI2A8K979 691 aaKnown RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 HGSO14964 777 aaPredicted RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 EDF1O60869 148 aaKnown RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 RHOQP17081 205 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 NMBRP28336 390 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 CCNFP41002 786 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ABCG1P45844 678 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 PSEN1P49768 467 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 SMARCB1Q12824 385 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 IHHQ14623 411 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 SEPT7Q16181 437 aaKnown RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 LRRC26Q2I0M4 334 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 DENND5AQ6IQ26 1287 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 CCNJLQ8IV13 435 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 ATP6V0D2Q8N8Y2 350 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 C2orf15Q8WU43 125 aaKnown RBP13.06□□□□□ -0.32
VAPB-203ENST00000463370 TOP1MTQ969P6 601 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 FCRL5Q96RD9 977 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 NAT9Q9BTE0 207 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 TMEM248Q9NWD8 314 aa13.06□□□□□ -0.32
VAPB-203ENST00000463370 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 PMPCBO75439 489 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 ZNF189O75820 626 aaPredicted RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 HMGA1P17096 107 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 MAXP61244 160 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 SPANXN3Q5MJ09 141 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 NDUFAF2Q8N183 169 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CFAP52Q8N1V2 620 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 PSMG2Q969U7 264 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 ATXN7L3BQ96GX2 97 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 RPRD1AQ96P16 312 aaPredicted RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 FICDQ9BVA6 458 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 UBE2OQ9C0C9 1292 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 OLA1Q9NTK5 396 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 ZFATQ9P243 1243 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 PPARGC1AQ9UBK2 798 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 PLLPQ9Y342 182 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 BACE2Q9Y5Z0 518 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 SHROOM3Q8TF72 1996 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 E2F8A0AVK6 867 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 TPP1O14773 563 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 GJB3O75712 270 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 PARNO95453 639 aaKnown RBP13.05□□□□□ -0.32
VAPB-203ENST00000463370 ALADP13716 330 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CSF2RAP15509 400 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 BGNP21810 368 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 SLC6A4P31645 630 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CHRNA4P43681 627 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CDH17Q12864 832 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 PRPSAP1Q14558 356 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 HSP90AA5PQ58FG0 334 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CES4AQ5XG92 561 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 TRPM8Q7Z2W7 1104 aa13.05□□□□□ -0.32
VAPB-203ENST00000463370 CHSY1Q86X52 802 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms