RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 FNDC5Q8NAU1 212 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 C19orf60Q96EN9 201 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 APOL5Q9BWW9 433 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 DPY30Q9C005 99 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 EFCAB10A6NFE3 127 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 NADKO95544 446 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 ZBTB11O95625 1053 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 ASLP04424 464 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 CYP1A1P04798 512 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 TALDO1P37837 337 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 IREB2P48200 963 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 POU6F1Q14863 301 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 HDDC2Q7Z4H3 204 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 FBXO39Q8N4B4 442 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 TTC30BQ8N4P2 665 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 FGFBP2Q9BYJ0 223 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 NOL11Q9H8H0 719 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 PNPLA8Q9NP80 782 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 SLC7A8Q9UHI5 535 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 DUSP12Q9UNI6 340 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 CLTCQ00610 1675 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 NFAT5O94916 1531 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 PREX1Q8TCU6 1659 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 RECQLP46063 649 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 SLC6A3Q01959 620 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 IL31Q6EBC2 164 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 ZNF470Q6ECI4 717 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 CNTD1Q8N815 330 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 BLOC1S5Q8TDH9 187 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 POP5Q969H6 163 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 KLHL20Q9Y2M5 609 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 TRIM17Q9Y577 477 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 SYNCRIPO60506 623 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 IFNA14P01570 189 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 TRAP1Q12931 704 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 RFX4Q33E94 735 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 PSTKQ8IV42 348 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 TBC1D21Q8IYX1 336 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 PROX1Q92786 737 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 CEP41Q9BYV8 373 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 SNX15Q9NRS6 342 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 KRT84Q9NSB2 600 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 EHD3Q9NZN3 535 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 LEF1Q9UJU2 399 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 GPC6Q9Y625 555 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 TMEM191CA6NGB0 347 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 NCF1BA6NI72 391 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 NCF1CA8MVU1 366 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 SMIM22K7EJ46 135 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 NCF1P14598 390 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 ITGA1P56199 1179 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 RPL7AP62424 266 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 FCHO2Q0JRZ9 810 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 ITPK1Q13572 414 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 DRICH1Q6PGQ1 229 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 UNC5AQ6ZN44 842 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 SLCO6A1Q86UG4 719 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 FAM228AQ86W67 206 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 CPT1BQ92523 772 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 DNAJC1Q96KC8 554 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 GPATCH1Q9BRR8 931 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 CCNB1IP1Q9NPC3 277 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 TMX2Q9Y320 296 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 BBIP1A8MTZ0 92 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 PARNO95453 639 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 H6PDO95479 791 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 FASTKD3Q14CZ7 662 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 TTLL9Q3SXZ7 439 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 KLHL12Q53G59 568 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 GALNT18Q6P9A2 607 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 MMP19Q99542 508 aa16.05■□□□□ 0.16
SMC4-204ENST00000462787 HOPXQ9BPY8 73 aaPredicted RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 MOV10Q9HCE1 1003 aaKnown RBP16.05■□□□□ 0.16
SMC4-204ENST00000462787 GAKO14976 1311 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 C2orf81A6NN90 581 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 CMPK2Q5EBM0 449 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 TXNRD3Q86VQ6 643 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 OR56A4Q8NGH8 313 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 KREMEN1Q96MU8 473 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 ZFYVE28Q9HCC9 887 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 FBXO28Q9NVF7 368 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 CALCAP01258 141 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 STAG3L1P0CL83 205 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 SLC5A3P53794 718 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 HMGCS2P54868 508 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 ARPC4P59998 168 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 HM13Q8TCT9 377 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 CIB1Q99828 191 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 UBP1Q9NZI7 540 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
SMC4-204ENST00000462787 C19orf81C9J6K1 198 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms