RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 RIN3Q8TB24 985 aa15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 EPS8L3Q8TE67 593 aaKnown RBP15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 GCNAQ96QF7 691 aa15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 VAT1Q99536 393 aa15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 PIH1D1Q9NWS0 290 aaKnown RBP15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 CFAP97Q9P2B7 532 aa15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 CCL26Q9Y258 94 aa15.33■□□□□ 0.04
RPRD1B-203ENST00000462548 ARHGAP42A6NI28 874 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 RFXAPO00287 272 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 ZNF189O75820 626 aaPredicted RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 HLA-DQB2P05538 268 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 GYS2P54840 703 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 CDH4P55283 916 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 KCTD16Q68DU8 428 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 LEKR1Q6ZMV7 388 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 RTL10Q7L3V2 364 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 MPP5Q8N3R9 675 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 SH2D3CQ8N5H7 860 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 EIF2B3Q9NR50 452 aaKnown RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 TEX264Q9Y6I9 313 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 SMIM23A6NLE4 172 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 SSTR1P30872 391 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 EIF3BP55884 814 aaKnown RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 SERINC3Q13530 473 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 KRT71Q3SY84 523 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 PRSS36Q5K4E3 855 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 KCTD11Q693B1 232 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 TIGD7Q6NT04 549 aaPredicted RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 PPP1R21Q6ZMI0 780 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 GRASPQ7Z6J2 395 aaPredicted RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 LRRC49Q8IUZ0 686 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 C12orf76Q8N812 135 aaPredicted RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 VN1R2Q8NFZ6 395 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 OR7D4Q8NG98 312 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 PYROXD1Q8WU10 500 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 ARHGEF2Q92974 986 aaKnown RBP15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 PLAC1Q9HBJ0 212 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 RBM22Q9NW64 420 aaKnown RBP eCLIP15.32■□□□□ 0.044e-7■■■■■ 29.9
RPRD1B-203ENST00000462548 UBP1Q9NZI7 540 aa15.32■□□□□ 0.04
RPRD1B-203ENST00000462548 HELZP42694 1942 aaKnown RBP15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 CCDC195A0A1B0GUA6 201 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 LEFTY2O00292 366 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 CACNG3O60359 315 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 LATS1O95835 1130 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 HNRNPA1P09651 372 aaKnown RBP eCLIP15.31■□□□□ 0.043e-7■■■□□ 15.2
RPRD1B-203ENST00000462548 LMAN1P49257 510 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 GABPB1Q06547 395 aaPredicted RBP15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 LONRF1Q17RB8 773 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 PARP15Q460N3 678 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 BBS7Q8IWZ6 715 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 SIGLEC10Q96LC7 697 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 TRIM56Q9BRZ2 755 aaKnown RBP15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 ACTL7AQ9Y615 435 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 GOLGA8KD6RF30 607 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 USP12O75317 370 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 ABHD2P08910 425 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 HOXD9P28356 352 aaPredicted RBP15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 SLCO1A2P46721 670 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 NRIP1P48552 1158 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 YBEYP58557 167 aaPredicted RBP15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 SLC10A7Q0GE19 358 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 ITPRIPL1Q6GPH6 555 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 CXorf57Q6NSI4 855 aaKnown RBP15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 HTR3DQ70Z44 454 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 FAM217AQ8IXS0 508 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 SPATA22Q8NHS9 363 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 TTC25Q96NG3 672 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 TMEM109Q9BVC6 243 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 CENPHQ9H3R5 247 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 TLE6Q9H808 572 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 VPS37BQ9H9H4 285 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 SP110Q9HB58 689 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 GLOD4Q9HC38 313 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 DONSONQ9NYP3 566 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 TTLL3Q9Y4R7 772 aa15.31■□□□□ 0.04
RPRD1B-203ENST00000462548 TLDC2A0PJX2 215 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 CLDN11O75508 207 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 AP2A1O95782 977 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 MYZAPP0CAP1 466 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 GNA12Q03113 381 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 DUSP6Q16828 381 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 CCDC38Q502W7 563 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 CHST9Q7L1S5 443 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 ZNF354CQ86Y25 554 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 KLHDC8BQ8IXV7 354 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 PABPC5Q96DU9 382 aaKnown RBP15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 FRMD8Q9BZ67 464 aaPredicted RBP15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 PDFQ9HBH1 243 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 VPS18Q9P253 973 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 MSRAQ9UJ68 235 aa15.3■□□□□ 0.04
RPRD1B-203ENST00000462548 A0A1B0GVM2 712 aa15.29■□□□□ 0.04
RPRD1B-203ENST00000462548 TCAF2A6NFQ2 919 aa15.29■□□□□ 0.04
RPRD1B-203ENST00000462548 TBL1XO60907 577 aa15.29■□□□□ 0.04
RPRD1B-203ENST00000462548 XYLBO75191 536 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms