RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 NDST4Q9H3R1 872 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 ARHGEF38Q9NXL2 777 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 AJAP1Q9UKB5 411 aaPredicted RBP18.36■□□□□ 0.53
SSB-206ENST00000461708 STAP1Q9ULZ2 295 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 LHX6Q9UPM6 363 aa18.36■□□□□ 0.53
SSB-206ENST00000461708 C1QTNF3-AMACRE9PGA6 284 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 MAGEC1O60732 1142 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 C1SP09871 688 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 GABRB2P47870 512 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 IRAK1P51617 712 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 KRT83P78385 493 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 SHBQ15464 509 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 TPD52L1Q16890 204 aaPredicted RBP18.35■□□□□ 0.53
SSB-206ENST00000461708 VWA3BQ502W6 1294 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 OTUD1Q5VV17 481 aaPredicted RBP18.35■□□□□ 0.53
SSB-206ENST00000461708 TMPRSS12Q86WS5 348 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 OR52K2Q8NGK3 314 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 C2orf49Q9BVC5 232 aaPredicted RBP18.35■□□□□ 0.53
SSB-206ENST00000461708 WDCPQ9H6R7 721 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 PIGVQ9NUD9 493 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.35■□□□□ 0.53
SSB-206ENST00000461708 ARHGAP20Q9P2F6 1191 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 SARDHQ9UL12 918 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 GPSM3Q9Y4H4 160 aa18.35■□□□□ 0.53
SSB-206ENST00000461708 DOCK4Q8N1I0 1966 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 ADAMTS20P59510 1910 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 WNT9AO14904 365 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 ITGAVP06756 1048 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 PPP2CBP62714 309 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 PPP2CAP67775 309 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 IL9RQ01113 521 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 CAMK2BQ13554 666 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 SLC25A52Q3SY17 297 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 ACCSLQ4AC99 568 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 MIIPQ5JXC2 388 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 AGBL4Q5VU57 503 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 C14orf80Q86SX3 495 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 SETD3Q86TU7 594 aaPredicted RBP18.34■□□□□ 0.53
SSB-206ENST00000461708 ZNF683Q8IZ20 524 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 TUBGCP2Q9BSJ2 902 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 PREBQ9HCU5 417 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 DOCK9Q9BZ29 2069 aa18.34■□□□□ 0.53
SSB-206ENST00000461708 IGLV3-10A0A075B6K4 115 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 GOLGA8CPA6NN73 597 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 DRGXA6NNA5 263 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 RNGTTO60942 597 aaKnown RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 RTN2O75298 545 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 ADCY5O95622 1261 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 LSM8O95777 96 aaKnown RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 CYP11B1P15538 503 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 EPHA8P29322 1005 aaPredicted RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 CLCN6P51797 869 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 METAP1P53582 386 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 CCDC15Q0P6D6 951 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 CNTN1Q12860 1018 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 SETMARQ53H47 684 aaPredicted RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 CT47A1Q5JQC4 288 aaPredicted RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 NEK5Q6P3R8 708 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 Q6ZVU0 165 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 ARCQ7LC44 396 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 PDCD7Q8N8D1 485 aaKnown RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 PIP4K2CQ8TBX8 421 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 C18orf8Q96DM3 657 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 CCDC114Q96M63 670 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 TKTL2Q9H0I9 626 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 SIK2Q9H0K1 926 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 MUC3BQ9H195 1237 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 CLSTN2Q9H4D0 955 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 DACH1Q9UI36 760 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
SSB-206ENST00000461708 CELSR3Q9NYQ7 3312 aa18.33■□□□□ 0.52
SSB-206ENST00000461708 TRABD2BA6NFA1 517 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 ENC1O14682 589 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 LDOC1O95751 146 aaPredicted RBP18.32■□□□□ 0.52
SSB-206ENST00000461708 SRCP12931 536 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 ZNF18P17022 549 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 DRAP1Q14919 205 aaPredicted RBP18.32■□□□□ 0.52
SSB-206ENST00000461708 PRAMEF14Q5SWL7 426 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 KLHDC7AQ5VTJ3 777 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 SFMBT2Q5VUG0 894 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 LRRC31Q6UY01 552 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 ZNF783Q6ZMS7 281 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 GATAD2AQ86YP4 633 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 DCAF4L2Q8NA75 395 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 TMIEQ8NEW7 156 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 MDM1Q8TC05 714 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 TSC1Q92574 1164 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 PSMB7Q99436 277 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 NAA15Q9BXJ9 866 aaKnown RBP18.32■□□□□ 0.52
SSB-206ENST00000461708 PDCL3Q9H2J4 239 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 SCUBE2Q9NQ36 999 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 PLCB1Q9NQ66 1216 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 ANLNQ9NQW6 1124 aa18.32■□□□□ 0.52
SSB-206ENST00000461708 PRAMEF26H0Y7S4 382 aa18.31■□□□□ 0.52
SSB-206ENST00000461708 I6L893 689 aaPredicted RBP18.31■□□□□ 0.52
SSB-206ENST00000461708 CNTN5O94779 1100 aa18.31■□□□□ 0.52
SSB-206ENST00000461708 RHOCP08134 193 aa18.31■□□□□ 0.52
SSB-206ENST00000461708 PNMA6AP0CW24 399 aaPredicted RBP18.31■□□□□ 0.52
SSB-206ENST00000461708 DEUP1Q05D60 604 aa18.31■□□□□ 0.52
SSB-206ENST00000461708 ILKQ13418 452 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms