RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RPS3AP61247 264 aaKnown RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 UFM1P61960 85 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 EFNB1P98172 346 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 MTA1Q13330 715 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 EIF4A2Q14240 407 aaKnown RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 GALNT3Q14435 633 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 EDRF1Q3B7T1 1238 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 TTLL5Q6EMB2 1281 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 RHPN2Q8IUC4 686 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 ULK2Q8IYT8 1036 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 NGEFQ8N5V2 710 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 PNLDC1Q8NA58 520 aaKnown RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 FAM47BQ8NA70 645 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 RAB40AQ8WXH6 277 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 ATP2A3Q93084 1043 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SMARCE1Q969G3 411 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 KLHL29Q96CT2 875 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 UROC1Q96N76 676 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 MRIQ9BWK5 157 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.42□□□□□ -1.86
VCL-203ENST00000461383 LMAN2LQ9H0V9 348 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 TOR3AQ9H497 397 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SLC32A1Q9H598 525 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 ENTPD7Q9NQZ7 604 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SLC22A11Q9NSA0 550 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 ASB6Q9NWX5 421 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 MPP6Q9NZW5 540 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SEMA5BQ9P283 1151 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 PEMTQ9UBM1 199 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 UPB1Q9UBR1 384 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 TLK1Q9UKI8 766 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SPATA31A5Q5VU36 1347 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SPATA31A6Q5VVP1 1343 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SPATA31A7Q8IWB4 1347 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 TCRBV7S3A2A0A539 114 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 TCRBV5S1A1TA0A578 114 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 A6NCN8 305 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 TTC36A6NLP5 189 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 TARM1B6A8C7 271 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 GTPBP1O00178 669 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 MSI1O43347 362 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 HNRNPCL1O60812 293 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 CLEC3BP05452 202 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 URODP06132 367 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 CHRM5P08912 532 aaPredicted RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 ST6GAL1P15907 406 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 ATF7P17544 494 aaPredicted RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 ALOX12P18054 663 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 PSMA4P25789 261 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 POU1F1P28069 291 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 ABCD1P33897 745 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 CACNA2D1P54289 1103 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 GOLGA8DPQ0D2H9 430 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 PTP4A2Q12974 167 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 MAMLD1Q13495 774 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 SLC18A3Q16572 532 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 CCNG2Q16589 344 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 C5orf22Q49AR2 442 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 UBAP2Q5T6F2 1119 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 FAM171A1Q5VUB5 890 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 TMEM268Q5VZI3 342 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 FAM205BPQ63HN1 556 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 AADACL2Q6P093 401 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 GJB7Q6PEY0 223 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 INO80CQ6PI98 192 aaPredicted RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 CYB5R4Q7L1T6 521 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 MDGA2Q7Z553 956 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 ARHGEF25Q86VW2 580 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 CPXM2Q8N436 756 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 SCAIQ8N9R8 606 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 FAM110DQ8TAY7 271 aaPredicted RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 LARP4BQ92615 738 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 KLHL15Q96M94 604 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 BBC3Q96PG8 261 aaPredicted RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 ZNF347Q96SE7 839 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 PRRX2Q99811 253 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 RANBP17Q9H2T7 1088 aaKnown RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 ERVK-5Q9HDB9 667 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 SEMA4BQ9NPR2 832 aaPredicted RBP3.41□□□□□ -1.86
VCL-203ENST00000461383 PCDHB16Q9NRJ7 776 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 TMEM248Q9NWD8 314 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 BABAM1Q9NWV8 329 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 TBC1D14Q9P2M4 693 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 VPS28Q9UK41 221 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 PACSIN3Q9UKS6 424 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 FBXO4Q9UKT5 387 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 GPR34Q9UPC5 381 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 DTX4Q9Y2E6 619 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 HS3ST3A1Q9Y663 406 aa3.41□□□□□ -1.86
VCL-203ENST00000461383 DPPA5A6NC42 116 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 OR6C68A6NDL8 312 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 C16orf96A6NNT2 1141 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 MGST3O14880 152 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 INPPL1O15357 1258 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 TIMM44O43615 452 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 DOK2O60496 412 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 RAMP2O60895 175 aa3.4□□□□□ -1.87
VCL-203ENST00000461383 SGPL1O95470 568 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms