RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 PAPOLAP51003 745 aaKnown RBP20.62■□□□□ 0.89
CCM2-203ENST00000461377 SETDB1Q15047 1291 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 TRIP4Q15650 581 aaPredicted RBP20.62■□□□□ 0.89
CCM2-203ENST00000461377 MS4A13Q5J8X5 152 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 RNF19BQ6ZMZ0 732 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 SPATA22Q8NHS9 363 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 MYLK2Q9H1R3 596 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 NOL6Q9H6R4 1146 aaKnown RBP20.62■□□□□ 0.89
CCM2-203ENST00000461377 OLA1Q9NTK5 396 aaKnown RBP20.62■□□□□ 0.89
CCM2-203ENST00000461377 COMMD8Q9NX08 183 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 TXNDC16Q9P2K2 825 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 CEP350Q5VT06 3117 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 SHROOM3Q8TF72 1996 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 TTC3P53804 2025 aa20.62■□□□□ 0.89
CCM2-203ENST00000461377 CFAP73A6NFT4 308 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 TBKBP1A7MCY6 615 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 ANXA9O76027 345 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 HAPLN1P10915 354 aaPredicted RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 RHOQP17081 205 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 OVGP1Q12889 678 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 SMAD1Q15797 465 aaKnown RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 MGAT5BQ3V5L5 792 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 KYAT3Q6YP21 454 aaKnown RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 RFWD2Q8NHY2 731 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 MFSD3Q96ES6 412 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 PPP1R2P1Q96PQ5 205 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 TBL1YQ9BQ87 522 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 MECRQ9BV79 373 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 TRIM55Q9BYV6 548 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 TLR8Q9NR97 1041 aaKnown RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 PPARGC1AQ9UBK2 798 aaKnown RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 MRPL42Q9Y6G3 142 aaKnown RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 NT5C1B-RDH14C9J2C7 533 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 HGSO14964 777 aaPredicted RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 BIRC5O15392 142 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 HLA-DQB2P05538 268 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 BPGMP07738 259 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 TPH1P17752 444 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 SKIV2L2P42285 1042 aaKnown RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 TAF10Q12962 218 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 PDE1CQ14123 709 aaPredicted RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 TEDDM1Q5T9Z0 273 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 NLRP9Q7RTR0 991 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 TMEM173Q86WV6 379 aaPredicted RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 UMODL1-AS1Q8N2C9 162 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 ATP6V0D2Q8N8Y2 350 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 RAB3IL1Q8TBN0 382 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 ISL2Q96A47 359 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 LRRC37BQ96QE4 947 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 RBBP8Q99708 897 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 SEPT5Q99719 369 aaPredicted RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 OXCT2Q9BYC2 517 aaPredicted RBP20.61■□□□□ 0.89
CCM2-203ENST00000461377 CHRAC1Q9NRG0 131 aa20.61■□□□□ 0.89
CCM2-203ENST00000461377 IGLV3-10A0A075B6K4 115 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 GLRA3O75311 464 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 TBX18O95935 607 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 TOP3BO95985 862 aaKnown RBP20.6■□□□□ 0.89
CCM2-203ENST00000461377 PBX3P40426 434 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 NDST2P52849 883 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 GEMP55040 296 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 RASIP1Q5U651 963 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 ANKS3Q6ZW76 656 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 TAS1R1Q7RTX1 841 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 C2orf15Q8WU43 125 aaKnown RBP20.6■□□□□ 0.89
CCM2-203ENST00000461377 BCL7CQ8WUZ0 217 aaPredicted RBP20.6■□□□□ 0.89
CCM2-203ENST00000461377 E2F7Q96AV8 911 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 ERP27Q96DN0 273 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 KIFC1Q9BW19 673 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 ZYG11BQ9C0D3 744 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 RBM22Q9NW64 420 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCM2-203ENST00000461377 TMEM248Q9NWD8 314 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 IPO11Q9UI26 975 aaKnown RBP20.6■□□□□ 0.89
CCM2-203ENST00000461377 TRIM17Q9Y577 477 aa20.6■□□□□ 0.89
CCM2-203ENST00000461377 PQBP1O60828 265 aaKnown RBP20.59■□□□□ 0.89
CCM2-203ENST00000461377 MT-CYBP00156 380 aaPredicted RBP20.59■□□□□ 0.89
CCM2-203ENST00000461377 IGLV3-27P01718 113 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 CXCL10P02778 98 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 MAGEA12P43365 314 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 LIMK2P53671 638 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 PDE1BQ01064 536 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 PSMD5Q16401 504 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 DBN1Q16643 649 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 ANO4Q32M45 955 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 ATG16L1Q676U5 607 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 KCNMB4Q86W47 210 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 NUDCD3Q8IVD9 361 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 SCLYQ96I15 445 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 BTN2A3PQ96KV6 586 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 TTPALQ9BTX7 342 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 PAK6Q9NQU5 681 aaPredicted RBP20.59■□□□□ 0.89
CCM2-203ENST00000461377 MARCH2Q9P0N8 246 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 EMCNQ9ULC0 261 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 MAGED2Q9UNF1 606 aaPredicted RBP20.59■□□□□ 0.89
CCM2-203ENST00000461377 NYNRINQ9P2P1 1898 aaKnown RBP20.59■□□□□ 0.89
CCM2-203ENST00000461377 ZDHHC11BP0C7U3 371 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 NMBRP28336 390 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 SPRP35270 261 aaPredicted RBP20.59■□□□□ 0.89
CCM2-203ENST00000461377 ADRA1AP35348 466 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 BST1Q10588 318 aa20.59■□□□□ 0.89
CCM2-203ENST00000461377 C10orf120Q5SQS8 335 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms