RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 CCDC175P0C221 793 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 HOXB3P14651 431 aaPredicted RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 AMPD1P23109 780 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 KDELR1P24390 212 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 OR1E1P30953 314 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 NTSR1P30989 418 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 PTPN7P35236 360 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 STK19P49842 368 aaPredicted RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 NDST2P52849 883 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 COPAP53621 1224 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 CDH6P55285 790 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 TPI1P60174 286 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 DMWDQ09019 674 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 CCDC173Q0VFZ6 552 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 KIF5AQ12840 1032 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 SERINC3Q13530 473 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 CAMK2GQ13555 558 aaPredicted RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 PAFAH1B3Q15102 231 aaKnown RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 PDK2Q15119 407 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 CRY1Q16526 586 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 HADHQ16836 314 aaKnown RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 HNRNPA1L2Q32P51 320 aaKnown RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 ZNF528Q3MIS6 628 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 PARP15Q460N3 678 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 PPP6R3Q5H9R7 873 aaPredicted RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 C9orf64Q5T6V5 341 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 NCBP2-AS2Q69YL0 99 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 RWDD4Q6NW29 188 aaKnown RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 MFSD7Q6UXD7 560 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 KIAA1328Q86T90 577 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 C1orf210Q8IVY1 113 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 RHOT1Q8IXI2 618 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 TXNDC5Q8NBS9 432 aaKnown RBP8.36□□□□□ -1.07
SND1-202ENST00000461056 HSPH1Q92598 858 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 EXOC4Q96A65 974 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 ACDQ96AP0 544 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 FAM131CQ96AQ9 280 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 RNF157Q96PX1 679 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 MAGEH1Q9H213 219 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 SLCO3A1Q9UIG8 710 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 FBXO4Q9UKT5 387 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 ERVW-1Q9UQF0 538 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 ACTL7AQ9Y615 435 aa8.36□□□□□ -1.07
SND1-202ENST00000461056 hCG_1818297A0A087WSY0 165 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 USP27XA6NNY8 438 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 TTC34A8MYJ7 566 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 RNF103O00237 685 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 FANCGO15287 622 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 NCAM2O15394 837 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 KDELR3O43731 214 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 MFSD11O43934 449 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 PRAMEF11O60813 436 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 RAMP2O60895 175 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 LILRB5O75023 590 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 FTCDO95954 541 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 SRPRAP08240 638 aaKnown RBP8.35□□□□□ -1.07
SND1-202ENST00000461056 SRCP12931 536 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 VAV1P15498 845 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 DESP17661 470 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 NOP2P46087 812 aaKnown RBP8.35□□□□□ -1.07
SND1-202ENST00000461056 SERPINH1P50454 418 aaKnown RBP8.35□□□□□ -1.07
SND1-202ENST00000461056 CCR3P51677 355 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 YBEYP58557 167 aaPredicted RBP8.35□□□□□ -1.07
SND1-202ENST00000461056 ECT2LQ008S8 904 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 GBE1Q04446 702 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 GALNT2Q10471 571 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 ANKRD20A8PQ5CZ79 823 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 ARHGAP36Q6ZRI8 547 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 DAAM2Q86T65 1068 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 SH2D3CQ8N5H7 860 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 CCDC33Q8N5R6 958 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 NETO2Q8NC67 525 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 ZBTB44Q8NCP5 570 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 CCDC26Q8TAB7 109 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 PTPRN2Q92932 1015 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 FATE1Q969F0 183 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 NSMCE3Q96MG7 304 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 OLFM3Q96PB7 478 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 FAM129BQ96TA1 746 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
SND1-202ENST00000461056 TSGA10Q9BZW7 698 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 CIPCQ9C0C6 399 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 SLC39A8Q9C0K1 460 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 MKRN2Q9H000 416 aaKnown RBP8.35□□□□□ -1.07
SND1-202ENST00000461056 MTG2Q9H4K7 406 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 CATSPERBQ9H7T0 1116 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 PRSS16Q9NQE7 514 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 DTLQ9NZJ0 730 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 EBF1Q9UH73 591 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 DNAI1Q9UI46 699 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 VPS28Q9UK41 221 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 DOCK4Q8N1I0 1966 aa8.35□□□□□ -1.07
SND1-202ENST00000461056 CCDC163A0A0D9SF12 145 aa8.34□□□□□ -1.07
SND1-202ENST00000461056 LRRD1A4D1F6 860 aa8.34□□□□□ -1.07
SND1-202ENST00000461056 SPOPO43791 374 aa8.34□□□□□ -1.07
SND1-202ENST00000461056 MAFKO60675 156 aa8.34□□□□□ -1.07
SND1-202ENST00000461056 ATG13O75143 517 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms