RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 WFDC5Q8TCV5 224 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ZDHHC5Q9C0B5 715 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ZYG11BQ9C0D3 744 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PCED1AQ9H1Q7 454 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TMEM245Q9H330 911 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 LUC7LQ9NQ29 371 aaKnown RBP13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TMPRSS4Q9NRS4 437 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CTTNBP2NLQ9P2B4 639 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 IP6K2Q9UHH9 426 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 INTUQ9ULD6 942 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 NENFQ9UMX5 172 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 NCKAP1Q9Y2A7 1128 aa13.6□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CEP192Q8TEP8 1941 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 IGLV3-10A0A075B6K4 115 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 A0A1B0GTW7 788 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 EIF3CLB5ME19 914 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 I6L893 689 aaPredicted RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PRPSAP2O60256 369 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RHOCP08134 193 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 HLA-EP13747 358 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 L1CAMP32004 1257 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 GGCXP38435 758 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PLK1P53350 603 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 COPAP53621 1224 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 OGDHQ02218 1023 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 HNRNPDQ14103 355 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SPA17Q15506 151 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RAB6CQ53S08 254 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 C6orf118Q5T5N4 469 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RWDD4Q6NW29 188 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SETD3Q86TU7 594 aaPredicted RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 PSTKQ8IV42 348 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ZNF683Q8IZ20 524 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CCDC185Q8N715 623 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TTC17Q96AE7 1141 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TBC1D31Q96DN5 1066 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 EIF3CQ99613 913 aaKnown RBP13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 RAB6CQ9H0N0 254 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 MIR1-1HGQ9H1L0 117 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 CAPN10Q9HC96 672 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 DONSONQ9NYP3 566 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 ANAPC7Q9UJX3 599 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 FZD10Q9ULW2 581 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SCML1Q9UN30 329 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 TBC1D30Q9Y2I9 924 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 SNX10Q9Y5X0 201 aa13.59□□□□□ -0.23
RAB11FIP3-207ENST00000461009 METTL12A8MUP2 240 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 IPO7O95373 1038 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 IGLV3-19P01714 112 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SRPRAP08240 638 aaKnown RBP13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 OR1E1P30953 314 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 HTR7P34969 479 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PCK1P35558 622 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 BOLA3Q53S33 107 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 DCAF12L1Q5VU92 463 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZNF776Q68DI1 518 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FAM124AQ86V42 546 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CIR1Q86X95 450 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CACUL1Q86Y37 369 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 RHOT2Q8IXI1 618 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MINDY1Q8N5J2 469 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 NIPA2Q8N8Q9 360 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 KDM1BQ8NB78 822 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZNF564Q8TBZ8 553 aaPredicted RBP13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 GANCQ8TET4 914 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CNTNAP3BQ96NU0 1288 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 EPAS1Q99814 870 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 FEM1AQ9BSK4 669 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CNTNAP3Q9BZ76 1288 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 TRIM7Q9C029 511 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 BTBD1Q9H0C5 482 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MPP6Q9NZW5 540 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PCSK1NQ9UHG2 260 aa13.58□□□□□ -0.24
RAB11FIP3-207ENST00000461009 UPK3BL1B0FP48 263 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 UPK3BL2E5RIL1 263 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 BCAT2O15382 392 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CNTN5O94779 1100 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 LRIG2O94898 1065 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 RHOQP17081 205 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MAOBP27338 520 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PMLP29590 882 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MIPP30301 263 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 CSKP41240 450 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 MAGEA1P43355 309 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZNF135P52742 658 aaPredicted RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 KRT83P78385 493 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ECT2LQ008S8 904 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ZNF252P-AS1Q0IIN9 211 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 SLC14A1Q13336 389 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 HADHQ16836 314 aaKnown RBP13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 PTPRNQ16849 979 aa13.57□□□□□ -0.24
RAB11FIP3-207ENST00000461009 ALFQ53S48 1182 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms