RNA–Protein interactions for RNA: ENST00000460621.6

VAMP7-203, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-203ENST00000460621 SLC12A1Q13621 1099 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PROX2Q3B8N5 592 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PIP5KL1Q5T9C9 394 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 HES3Q5TGS1 186 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 RNF219Q5W0B1 726 aaPredicted RBP11.23□□□□□ -0.61
VAMP7-203ENST00000460621 TRNP1Q6NT89 227 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 SH2D3CQ8N5H7 860 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 MFSD2AQ8NA29 543 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 CHST14Q8NCH0 376 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 C1orf131Q8NDD1 294 aaKnown RBP11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PIP4K2CQ8TBX8 421 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PPP1R13BQ96KQ4 1090 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 RPRD1AQ96P16 312 aaPredicted RBP11.23□□□□□ -0.61
VAMP7-203ENST00000460621 NOX5Q96PH1 765 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 ERVMER34-1Q9H9K5 563 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PIGVQ9NUD9 493 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 ASNSD1Q9NWL6 643 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 UCKL1Q9NWZ5 548 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 TBC1D30Q9Y2I9 924 aa11.23□□□□□ -0.61
VAMP7-203ENST00000460621 HELZ2Q9BYK8 2649 aaKnown RBP11.22□□□□□ -0.61
VAMP7-203ENST00000460621 A0A0D9SEW6 157 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 BICDL2A1A5D9 508 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 FOXN3O00409 490 aaPredicted RBP11.22□□□□□ -0.61
VAMP7-203ENST00000460621 MED7O43513 233 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 SIGLEC6O43699 453 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 GNA14O95837 355 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 PRLRP16471 622 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 CCR1P32246 355 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 USP8P40818 1118 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 EIF2S3P41091 472 aaKnown RBP11.22□□□□□ -0.61
VAMP7-203ENST00000460621 NUCB2P80303 420 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 CDK17Q00537 523 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 SEMG2Q02383 582 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 SULT2A1Q06520 285 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 NME3Q13232 169 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 ACCSLQ4AC99 568 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 RAB6CQ53S08 254 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 OR6B2Q6IFH4 312 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 SLC47A2Q86VL8 602 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 TRIM69Q86WT6 500 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 CCDC117Q8IWD4 279 aaPredicted RBP11.22□□□□□ -0.61
VAMP7-203ENST00000460621 OR2A12Q8NGT7 310 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 NPY6RQ99463 290 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 MYOCQ99972 504 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 RAB6CQ9H0N0 254 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 FZD3Q9NPG1 666 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 ZNF212Q9UDV6 495 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 ZFR2Q9UPR6 939 aaKnown RBP11.22□□□□□ -0.61
VAMP7-203ENST00000460621 ACTL7AQ9Y615 435 aa11.22□□□□□ -0.61
VAMP7-203ENST00000460621 LY6G6EA0A0G2JKS1 128 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 A0A1W2PQU0 124 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 DRGXA6NNA5 263 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 M0QYT0 321 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SLC31A1O15431 190 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SLC7A4O43246 635 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 BNIP3LO60238 219 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 RNGTTO60942 597 aaKnown RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 HSF2BPO75031 334 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 DAB1O75553 588 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 C1QL1O75973 258 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 GLI1P08151 1106 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 C1SP09871 688 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 RRM1P23921 792 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 PPP1R2P41236 205 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 CXCR3P49682 368 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 CLDN2P57739 230 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 INSM1Q01101 510 aaPredicted RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SFSWAPQ12872 951 aaKnown RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 FGL2Q14314 439 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 RTP5Q14D33 572 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 ZNF284Q2VY69 593 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 C2CD6Q53TS8 623 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 LINGO4Q6UY18 593 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 KDM7AQ6ZMT4 941 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 C11orf57Q6ZUT1 292 aaPredicted RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SLC26A9Q7LBE3 791 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 PRPF39Q86UA1 669 aaKnown RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SLC22A18ASQ8N1D0 253 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 OR8D1Q8WZ84 308 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 NT5C3BQ969T7 300 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 MAGEB5Q9BZ81 275 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 SIK2Q9H0K1 926 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 PRORYQ9H606 182 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 MPP6Q9NZW5 540 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 APEX2Q9UBZ4 518 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 VPS51Q9UID3 782 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 HOOK1Q9UJC3 728 aaKnown RBP11.21□□□□□ -0.61
VAMP7-203ENST00000460621 VPS28Q9UK41 221 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 HS3ST2Q9Y278 367 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 U3KQA8 63 aa11.21□□□□□ -0.61
VAMP7-203ENST00000460621 TDRD6O60522 2096 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms