RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 C9orf64Q5T6V5 341 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 ALKBH5Q6P6C2 394 aaKnown RBP15.32■□□□□ 0.04
ATG4B-213ENST00000460211 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 DCAF4L2Q8NA75 395 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 GANCQ8TET4 914 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 PIGKQ92643 395 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 EPAS1Q99814 870 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 SPON2Q9BUD6 331 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 RSPH9Q9H1X1 276 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-213ENST00000460211 DONSONQ9NYP3 566 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 FZD10Q9ULW2 581 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-213ENST00000460211 OR51B4Q9Y5P0 310 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 ABCA7Q8IZY2 2146 aa15.32■□□□□ 0.04
ATG4B-213ENST00000460211 A0A087X0T9 212 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 EIF3CLB5ME19 914 aaKnown RBP15.31■□□□□ 0.04
ATG4B-213ENST00000460211 PRPSAP2O60256 369 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 IGLV3-19P01714 112 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 FAM228BP0C875 321 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 NUMBP49757 651 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 STK19P49842 368 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-213ENST00000460211 RPS14P62263 151 aaKnown RBP15.31■□□□□ 0.04
ATG4B-213ENST00000460211 OGDHQ02218 1023 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 GNA12Q03113 381 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF33AQ06730 810 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 SLC20A2Q08357 652 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF252P-AS1Q0IIN9 211 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 MANEALQ5VSG8 457 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 RETSATQ6NUM9 610 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 SARM1Q6SZW1 724 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 ARMCX6Q7L4S7 300 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 RABEPKQ7Z6M1 372 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 DSG4Q86SJ6 1040 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 DNAAF5Q86Y56 855 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 SYT12Q8IV01 421 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 ATP11CQ8NB49 1132 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 OR52K2Q8NGK3 314 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 TOE1Q96GM8 510 aaKnown RBP15.31■□□□□ 0.04
ATG4B-213ENST00000460211 CCDC114Q96M63 670 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 EIF3CQ99613 913 aaKnown RBP15.31■□□□□ 0.04
ATG4B-213ENST00000460211 DNAJC7Q99615 494 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 CATSPERBQ9H7T0 1116 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 TMEM248Q9NWD8 314 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 WSB2Q9NYS7 404 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-213ENST00000460211 ARHGAP20Q9P2F6 1191 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 ZMIZ1Q9ULJ6 1067 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 HPCAL4Q9UM19 191 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 NUP205Q92621 2012 aa15.31■□□□□ 0.04
ATG4B-213ENST00000460211 A0A0D9SEW6 157 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 LNP1A1A4G5 178 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 CBX4O00257 560 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 KHNYNO15037 678 aaKnown RBP15.3■□□□□ 0.04
ATG4B-213ENST00000460211 ATP9BO43861 1147 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 TOP3BO95985 862 aaKnown RBP15.3■□□□□ 0.04
ATG4B-213ENST00000460211 C7P10643 843 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 EPHB2P29323 1055 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 HTR7P34969 479 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 HOXD12P35452 270 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 EIF4A3P38919 411 aaKnown RBP15.3■□□□□ 0.04
ATG4B-213ENST00000460211 PTGER3P43115 390 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 CLCN6P51797 869 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 ELAVL3Q14576 367 aaKnown RBP15.3■□□□□ 0.04
ATG4B-213ENST00000460211 DLG2Q15700 870 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 WDR45BQ5MNZ6 344 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 ERMARDQ5T6L9 678 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 CNGA4Q8IV77 575 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 DEFB119Q8N690 84 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 CADM4Q8NFZ8 388 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 OR8D1Q8WZ84 308 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 PTPRN2Q92932 1015 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 ZNF419Q96HQ0 510 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-213ENST00000460211 BTBD1Q9H0C5 482 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 MAGEH1Q9H213 219 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 ATP13A1Q9HD20 1204 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 VPS51Q9UID3 782 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 HS3ST2Q9Y278 367 aa15.3■□□□□ 0.04
ATG4B-213ENST00000460211 GON4LQ3T8J9 2241 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 THADAQ6YHU6 1953 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 SSU72P8A0A1W2PR75 194 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PATE3B3GLJ2 98 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FAM72CH0Y354 149 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 CREB3O43889 395 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 AKR1B10O60218 316 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 SNAP91O60641 907 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 RAMP2O60895 175 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 MFAP3LO75121 409 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 ADH1BP00325 375 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 RECQLP46063 649 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 GEMIN4P57678 1058 aaKnown RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 PIGHQ14442 188 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-213ENST00000460211 CST6Q15828 149 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 SLC18A3Q16572 532 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FAM72AQ5TYM5 149 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FAM46CQ5VWP2 391 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 DAB2IPQ5VWQ8 1189 aa15.29■□□□□ 0.04
ATG4B-213ENST00000460211 FAM72DQ6L9T8 149 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms