RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 FAM84BQ96KN1 310 aaPredicted RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 TDRKHQ9Y2W6 561 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 SPATA31D1Q6ZQQ2 1576 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 CPA3P15088 417 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 ACO1P21399 889 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 VBP1P61758 197 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 ROR2Q01974 943 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 POTEHQ6S545 545 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 MFSD7Q6UXD7 560 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 ZNF410Q86VK4 478 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 PSMA8Q8TAA3 256 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 MIEF2Q96C03 454 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 TPD52L3Q96J77 140 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 UROC1Q96N76 676 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 SOX11P35716 441 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 CBX5P45973 191 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 CCR3P51677 355 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 ARFIP1P53367 373 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 C1QBPQ07021 282 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 GALNT3Q14435 633 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 CBWD6Q4V339 395 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 GLT6D1Q7Z4J2 308 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 NOA1Q8NC60 698 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 SOCS4Q8WXH5 440 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 SLC25A23Q9BV35 468 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 STARD7Q9NQZ5 370 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 CLN6Q9NWW5 311 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
SHROOM4-203ENST00000460112 FAM208AQ9UK61 1670 aaKnown RBP9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 PDE2AO00408 941 aaPredicted RBP9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 SNAP91O60641 907 aa9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 PDHBP11177 359 aa9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 CASP1P29466 404 aa9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 GMCL1P1Q8NEA9 526 aa9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 TNFSF13BQ9Y275 285 aa9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 COMMD3-BMI1R4GMX3 469 aa9.02□□□□□ -0.96
SHROOM4-203ENST00000460112 MAGEB3O15480 346 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CYP27B1O15528 508 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 RASA2Q15283 850 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PPM1LQ5SGD2 360 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 R3HCC1LQ7Z5L2 792 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PHC3Q8NDX5 983 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 B3GALT6Q96L58 329 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 TMEM120AQ9BXJ8 343 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PCDH9Q9HC56 1237 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 MGAT4AQ9UM21 535 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 LTN1O94822 1766 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 IFT172Q9UG01 1749 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 S100A6P06703 90 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 FGFR1P11362 822 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CTSEP14091 401 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 NEK3P51956 506 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 EIF3MQ7L2H7 374 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 KBTBD8Q8NFY9 601 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 STOML2Q9UJZ1 356 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 A0A0X1KG70 313 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 SEC22BO75396 215 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CYP11B2P19099 503 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 RFX4Q33E94 735 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 KCNMB4Q86W47 210 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 GJD3Q8N144 294 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 LPCAT1Q8NF37 534 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 TSPAN14Q8NG11 270 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 OPTCQ9UBM4 332 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 UMODL1Q5DID0 1318 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 LOC100653049A0A140TA62 436 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 BTN3A3O00478 584 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 HOXC12P31275 282 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 SLC29A2Q14542 456 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 ZCCHC7Q8N3Z6 543 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 ISCA1Q9BUE6 129 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 TTLL2Q9BWV7 592 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 AGPAT3Q9NRZ7 376 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 ZDHHC9Q9Y397 364 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 TRIM17Q9Y577 477 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 TAF6LQ9Y6J9 622 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CEP170BQ9Y4F5 1589 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CCDC162PA2VCL2 907 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 STX16-NPEPL1H3BU86 382 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 STX16O14662 325 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CSH1P0DML2 217 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CSH2P0DML3 217 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PRG2P13727 222 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CES1P23141 567 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 HTR1BP28222 390 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 SCNN1BP51168 640 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PRR23CQ6ZRP0 262 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 DSELQ8IZU8 1212 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 GORASP1Q9BQQ3 440 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 MTG1Q9BT17 334 aaPredicted RBP9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 SOHLH2Q9NX45 425 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 HEY2Q9UBP5 337 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 MSRAQ9UJ68 235 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 MCIDASD6RGH6 385 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 PGM3O95394 542 aa9.02□□□□□ -0.97
SHROOM4-203ENST00000460112 CYP2C18P33260 490 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms