RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783		A0A0A6YYK5	440 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	CCDC163	A0A0D9SF12	145 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	C3orf70	A6NLC5	250 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	RASA4B	C9J798	803 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	FGF10	O15520	208 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	RASA4	O43374	803 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	BUB1	O43683	1085 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	ATP9B	O43861	1147 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	RAMP2	O60895	175 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	MOCS3	O95396	460 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	SRPRA	P08240	638 aa	Known RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	COMT	P21964	271 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	HTR7	P34969	479 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	ARHGAP25	P42331	645 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	VASP	P50552	380 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	METAP1	P53582	386 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	OXCT1	P55809	520 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	GSDMD	P57764	484 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	DPYSL3	Q14195	570 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	MAP7D1	Q3KQU3	841 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	ZNF783	Q6ZMS7	281 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	ARHGAP36	Q6ZRI8	547 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	CCDC117	Q8IWD4	279 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	SH2D3C	Q8N5H7	860 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	KDM1B	Q8NB78	822 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	SUMF1	Q8NBK3	374 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	TPCN2	Q8NHX9	752 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	FAM129B	Q96TA1	746 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	NCAPG	Q9BPX3	1015 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	SLC39A8	Q9C0K1	460 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	ATP13A1	Q9HD20	1204 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	POLM	Q9NP87	494 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	MBD1	Q9UIS9	605 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	PLA2G4C	Q9UP65	541 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	ADGRG1	Q9Y653	693 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	EML5	Q05BV3	1969 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	FANCM	Q8IYD8	2048 aa		10.5	□□□□□ -0.73
MRPL55-223	ENST00000459783	CHD5	Q8TDI0	1954 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	BTNL10	A8MVZ5	291 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	PROB1	E7EW31	1015 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783		H3BRJ5	948 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	CBX4	O00257	560 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	DES	P17661	470 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	P2RY2	P41231	377 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	SSR1	P43307	286 aa	Known RBP	10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	CDH6	P55285	790 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	RPS14	P62263	151 aa	Known RBP	10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	SULT2A1	Q06520	285 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	SERINC3	Q13530	473 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	DLG2	Q15700	870 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	SDE2	Q6IQ49	451 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783		Q6ZVU0	165 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	TMPRSS6	Q8IU80	811 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	LRRC8A	Q8IWT6	810 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	STK40	Q8N2I9	435 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	PQLC3	Q8N755	202 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	LRRC57	Q8N9N7	239 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	OR2T3	Q8NH03	318 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	PCDH19	Q8TAB3	1148 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	GAB3	Q8WWW8	586 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	FAF2	Q96CS3	445 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	PDLIM2	Q96JY6	352 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	MAGEH1	Q9H213	219 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	EPC1	Q9H2F5	836 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	RETREG1	Q9H6L5	497 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	PDF	Q9HBH1	243 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	SERGEF	Q9UGK8	458 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	FCF1	Q9Y324	198 aa	Known RBP	10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	ALG6	Q9Y672	507 aa		10.49	□□□□□ -0.73
MRPL55-223	ENST00000459783	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	GRID2IP	A4D2P6	1211 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783		J3KR12	359 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	KDELR3	O43731	214 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	CTSL	P07711	333 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	NOP2	P46087	812 aa	Known RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	SERPINH1	P50454	418 aa	Known RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	NRL	P54845	237 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	YBEY	P58557	167 aa	Predicted RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	ST8SIA6	P61647	398 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	STARD3	Q14849	445 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	POLD3	Q15054	466 aa	Predicted RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	LPAL2	Q16609	132 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	HADH	Q16836	314 aa	Known RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	NCBP2-AS2	Q69YL0	99 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	IL31	Q6EBC2	164 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	C11orf63	Q6NUN7	778 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	C22orf39	Q6P5X5	142 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	ASCL5	Q7RTU5	278 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	KBTBD6	Q86V97	674 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	CHST14	Q8NCH0	376 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	OR2A12	Q8NGT7	310 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	KRT35	Q92764	455 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	RSPH9	Q9H1X1	276 aa	Predicted RBP	10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	TNKS2	Q9H2K2	1166 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	KCNF1	Q9H3M0	494 aa		10.48	□□□□□ -0.73
MRPL55-223	ENST00000459783	CATSPERB	Q9H7T0	1116 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms