RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 RING1Q06587 406 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 CKAP4Q07065 602 aaKnown RBP10.59□□□□□ -0.71
USP39-210ENST00000459775 NNTQ13423 1086 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 FAM78AQ5JUQ0 283 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 MANEALQ5VSG8 457 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 NUGGCQ68CJ6 796 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 SLC9A4Q6AI14 798 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 ARHGAP36Q6ZRI8 547 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 RTL10Q7L3V2 364 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 TADA2BQ86TJ2 420 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 ADHFE1Q8IWW8 467 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 CEP112Q8N8E3 955 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 ATP6V0D2Q8N8Y2 350 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 OR52K2Q8NGK3 314 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 PABPC5Q96DU9 382 aaKnown RBP10.59□□□□□ -0.71
USP39-210ENST00000459775 ZFYVE19Q96K21 471 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 RPRD1AQ96P16 312 aaPredicted RBP10.59□□□□□ -0.71
USP39-210ENST00000459775 CDK5RAP1Q96SZ6 601 aaKnown RBP10.59□□□□□ -0.71
USP39-210ENST00000459775 TRIM51Q9BSJ1 452 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 TMEM121Q9BTD3 319 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 STIM2Q9P246 746 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 PRKAB1Q9Y478 270 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 OBSL1O75147 1896 aa10.59□□□□□ -0.71
USP39-210ENST00000459775 APOL1O14791 398 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 DCLK1O15075 740 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TTI1O43156 1089 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 RAD51CO43502 376 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ZSCAN5DPP0CG00 497 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 IL9P15248 144 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 PTPN7P35236 360 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TUBB2AQ13885 445 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 KIAA1614Q5VZ46 1190 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TPGS1Q6ZTW0 290 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ZNF572Q7Z3I7 529 aaPredicted RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 PSTKQ8IV42 348 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 UNC45BQ8IWX7 931 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 LGMNQ99538 433 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TUBB2BQ9BVA1 445 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TDP1Q9NUW8 608 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 DZANK1Q9NVP4 752 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 DTLQ9NZJ0 730 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ZFP37Q9Y6Q3 630 aaPredicted RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 MUC3AQ02505 3323 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 C2orf16Q68DN1 1984 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ESYT3A0FGR9 886 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ZSCAN9O15535 394 aaPredicted RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 LIASO43766 372 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 CETN2P41208 172 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 SLC11A2P49281 568 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 AIF1P55008 147 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 GDF10P55107 478 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TAGLNQ01995 201 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 ZP2Q05996 745 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 SFSWAPQ12872 951 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 BRD3Q15059 726 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ARHGAP15Q53QZ3 475 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 TRIM68Q6AZZ1 485 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ZNF449Q6P9G9 518 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 CCDC137Q6PK04 289 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 Q6ZNB5 142 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 BMP8AQ7Z5Y6 402 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 SPATS2Q86XZ4 545 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 P3H4Q92791 437 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 PLD4Q96BZ4 506 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 MYADMQ96S97 322 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 RPP25Q9BUL9 199 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 CEP41Q9BYV8 373 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 KLC2Q9H0B6 622 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 POMKQ9H5K3 350 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 NOL6Q9H6R4 1146 aaKnown RBP10.58□□□□□ -0.72
USP39-210ENST00000459775 RNF14Q9UBS8 474 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 SLC12A6Q9UHW9 1150 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 CLEC4EQ9ULY5 219 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ARHGAP26Q9UNA1 814 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 WNT6Q9Y6F9 365 aa10.58□□□□□ -0.72
USP39-210ENST00000459775 ZNF197O14709 1029 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 PHF2O75151 1096 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 CTHP32929 405 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 COILP38432 576 aaPredicted RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 VPS41P49754 854 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 KPNA1P52294 538 aaPredicted RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 EIF3EP60228 445 aaKnown RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 TFDP2Q14188 446 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 ADGRF1Q5T601 910 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 LEKR1Q6ZMV7 388 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 RAVER1Q8IY67 606 aaKnown RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 MSLNLQ96KJ4 702 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 C1orf74Q96LT6 269 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 CCDC114Q96M63 670 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 TRIM31Q9BZY9 425 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 BRWD1Q9NSI6 2320 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 F5H423 210 aaPredicted RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 F5H5T6 163 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 APOC4-APOC2K7ER74 178 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 APOC2P02655 101 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 PTGIRP43119 386 aa10.57□□□□□ -0.72
USP39-210ENST00000459775 GEMIN4P57678 1058 aaKnown RBP10.57□□□□□ -0.72
USP39-210ENST00000459775 ELF2Q15723 593 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms