RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CCSAPQ6IQ19 270 aaPredicted RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 MGRN1O60291 552 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 RASGRP1O95267 797 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 ERVK-9P63128 1117 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 ERVK-24P63145 666 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 GRB14Q14449 540 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 ATP13A4Q4VNC1 1196 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 OR52L1Q8NGH7 329 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 NMD3Q96D46 503 aaKnown RBP16.28■□□□□ 0.2
HDAC7-217ENST00000459625 TLE6Q9H808 572 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 TMPRSS4Q9NRS4 437 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 KIAA1257Q9ULG3 409 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 NDUFAF1Q9Y375 327 aa16.28■□□□□ 0.2
HDAC7-217ENST00000459625 RGS14O43566 566 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 RGS1Q08116 209 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ACSM2AQ08AH3 577 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 GRB10Q13322 594 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ATP1A4Q13733 1029 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ACSM2BQ68CK6 577 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 SCIMPQ6UWF3 145 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 RASGRP2Q7LDG7 609 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 PRSS58Q8IYP2 241 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ZNF248Q8NDW4 579 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 SETD6Q8TBK2 473 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ZBTB45Q96K62 511 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-217ENST00000459625 EQTNQ9NQ60 294 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ELOVL2Q9NXB9 296 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 CALCAP01258 141 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 H2AFXP16104 143 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-217ENST00000459625 MASP1P48740 699 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-217ENST00000459625 SLC41A1Q8IVJ1 513 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 DEFB107AQ8IZN7 70 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 SELENOMQ8WWX9 145 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 NSMCE2Q96MF7 247 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ZFP14Q9HCL3 533 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 GPR75-ASB3A0A0A6YYF3 556 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 IGFALSP35858 605 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 SNRPD1P62314 119 aaKnown RBP16.27■□□□□ 0.2
HDAC7-217ENST00000459625 PAGE2BQ5JRK9 111 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 AGBL2Q5U5Z8 902 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 RAD9BQ6WBX8 426 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ZCCHC23Q6ZST2 131 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.2
HDAC7-217ENST00000459625 ATXN2Q99700 1313 aaKnown RBP16.27■□□□□ 0.2
HDAC7-217ENST00000459625 PCCBP05166 539 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 PMF1Q6P1K2 205 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 STK32CQ86UX6 486 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 ROPN1BQ9BZX4 212 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-217ENST00000459625 ROPN1Q9HAT0 212 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-217ENST00000459625 FKTNO75072 461 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 HK2P52789 917 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 SP3Q02447 781 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 CCNI2Q6ZMN8 369 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-217ENST00000459625 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 RIBC1Q8N443 379 aaPredicted RBP16.27■□□□□ 0.19
HDAC7-217ENST00000459625 SMPDL3BQ92485 455 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 ULBP1Q9BZM6 244 aa16.27■□□□□ 0.19
HDAC7-217ENST00000459625 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 MAD2L1Q13257 205 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 WSCD1Q658N2 575 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 PGBD2Q6P3X8 592 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 C17orf75Q9HAS0 396 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 MRGBPQ9NV56 204 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 CRADDP78560 199 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 RASA2Q15283 850 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 KIAA0408Q6ZU52 694 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 FAM129CQ86XR2 697 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 ATP8B4Q8TF62 1192 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 TTLL2Q9BWV7 592 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 LOC100506127A0A0U1RQW1 187 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 LRATO95237 230 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 NR2F1P10589 423 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 HOXC12P31275 282 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 ZC3H12AQ5D1E8 599 aaKnown RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 ULK3Q6PHR2 472 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 ENKURQ8TC29 256 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 FAM126AQ9BYI3 521 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 DNMT3LQ9UJW3 386 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 EFCAB10A6NFE3 127 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 PSMD9O00233 223 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 ECDO95905 644 aaPredicted RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 MPOP05164 745 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 GALNT3Q14435 633 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 NR1I3Q14994 352 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 PFKFB4Q16877 469 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 FAM98AQ8NCA5 519 aaKnown RBP16.26■□□□□ 0.19
HDAC7-217ENST00000459625 DHRS1Q96LJ7 313 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 ELOVL4Q9GZR5 314 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
HDAC7-217ENST00000459625 KANSL1LA0AUZ9 987 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms