RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MBD1Q9UIS9 605 aaPredicted RBP16.54■□□□□ 0.24
CD28-203ENST00000458610 ZFHX2Q9C0A1 2572 aaPredicted RBP16.53■□□□□ 0.24
CD28-203ENST00000458610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 ZSCAN5CA6NGD5 496 aaPredicted RBP16.53■□□□□ 0.24
CD28-203ENST00000458610 ALOX15BO15296 676 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 BCKDHBP21953 392 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 RECQLP46063 649 aaPredicted RBP16.53■□□□□ 0.24
CD28-203ENST00000458610 HCAR3P49019 387 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 STK19P49842 368 aaPredicted RBP16.53■□□□□ 0.24
CD28-203ENST00000458610 ZNF252P-AS1Q0IIN9 211 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 SPEM2Q0P670 501 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 SYCP2LQ5T4T6 812 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 FAM46CQ5VWP2 391 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 LYSMD4Q5XG99 296 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 USP30Q70CQ3 517 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 CYP2U1Q7Z449 544 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 TMEFF1Q8IYR6 380 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 ARFGAP1Q8N6T3 406 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 CADM4Q8NFZ8 388 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 OR7D4Q8NG98 312 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 ZNF564Q8TBZ8 553 aaPredicted RBP16.53■□□□□ 0.24
CD28-203ENST00000458610 GANCQ8TET4 914 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 PTPRN2Q92932 1015 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 PSMB7Q99436 277 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 MAGEB5Q9BZ81 275 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 TRIM7Q9C029 511 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 CEP44Q9C0F1 390 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 PCED1AQ9H1Q7 454 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 ZWILCHQ9H900 591 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 WSB2Q9NYS7 404 aaPredicted RBP16.53■□□□□ 0.24
CD28-203ENST00000458610 INTUQ9ULD6 942 aa16.53■□□□□ 0.24
CD28-203ENST00000458610 BCLAF3A2AJT9 711 aaKnown RBP16.52■□□□□ 0.24
CD28-203ENST00000458610 SNAP91O60641 907 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 ADH1BP00325 375 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 ZNF806P0C7X5 589 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 C5AR1P21730 350 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 SDHBP21912 280 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 ARL4AP40617 200 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 SSR1P43307 286 aaKnown RBP16.52■□□□□ 0.24
CD28-203ENST00000458610 LMNB2Q03252 620 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 CCDC15Q0P6D6 951 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 PARP15Q460N3 678 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 WDR45BQ5MNZ6 344 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 ARTNQ5T4W7 220 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 RABEPKQ7Z6M1 372 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 ZNF354CQ86Y25 554 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 RHOT2Q8IXI1 618 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 UMODL1-AS1Q8N2C9 162 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 TC2NQ8N9U0 490 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 FRS2Q8WU20 508 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 TEKT4Q8WW24 435 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 ARHGEF2Q92974 986 aaKnown RBP16.52■□□□□ 0.24
CD28-203ENST00000458610 TOE1Q96GM8 510 aaKnown RBP16.52■□□□□ 0.24
CD28-203ENST00000458610 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 SNRNP25Q9BV90 132 aaKnown RBP16.52■□□□□ 0.24
CD28-203ENST00000458610 ACE2Q9BYF1 805 aaPredicted RBP16.52■□□□□ 0.24
CD28-203ENST00000458610 BTBD1Q9H0C5 482 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 MTG2Q9H4K7 406 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 SGK2Q9HBY8 427 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 SEMA4GQ9NTN9 838 aa16.52■□□□□ 0.24
CD28-203ENST00000458610 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 PRR5-ARHGAP8B1AHC4 643 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 C1QTNF3-AMACRE9PGA6 284 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 H3BRJ5 948 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 MCF2LO15068 1137 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 KDELR3O43731 214 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 SRCP12931 536 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 SLC8A1P32418 973 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 HOXD12P35452 270 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 MPLP40238 635 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 NDST2P52849 883 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 ARHGAP8P85298 464 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 ZNF33AQ06730 810 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 SPA17Q15506 151 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 CST6Q15828 149 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 PPP6R3Q5H9R7 873 aaPredicted RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 TMTC1Q8IUR5 882 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 SYT12Q8IV01 421 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 KIAA2013Q8IYS2 634 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 STK40Q8N2I9 435 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 FRMD1Q8N878 549 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 C12orf50Q8NA57 414 aaPredicted RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 CASKIN2Q8WXE0 1202 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 ARHGEF26Q96DR7 871 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 ZNF419Q96HQ0 510 aaPredicted RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 FAM129BQ96TA1 746 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 OMDQ99983 421 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 PABPC3Q9H361 631 aaKnown RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 SPTLC3Q9NUV7 552 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
CD28-203ENST00000458610 PTPRZ1P23471 2315 aaPredicted RBP16.51■□□□□ 0.23
CD28-203ENST00000458610 ZMPSTE24O75844 475 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 PROSCO94903 275 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 IPO7O95373 1038 aaKnown RBP16.5■□□□□ 0.23
CD28-203ENST00000458610 IL1BP01584 269 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 ARHGAP25P42331 645 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms