RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 CBSP35520 551 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 PPM1AP35813 382 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 FOLR3P41439 243 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MCM2P49736 904 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 NAPAP54920 295 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 HTRA4P83105 476 aaPredicted RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 CREMQ03060 361 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 EIF2B5Q13144 721 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 PGM5Q15124 567 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 ZRSR2Q15696 482 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 IZUMO3Q5VZ72 239 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 C11orf87Q6NUJ2 197 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 FOXR2Q6PJQ5 311 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 CTU1Q7Z7A3 348 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 DPP9Q86TI2 863 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 COLGALT2Q8IYK4 626 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 ACRBPQ8NEB7 543 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MYRIPQ8NFW9 859 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 BRIX1Q8TDN6 353 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 ERO1AQ96HE7 468 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF333Q96JL9 665 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 RMDN3Q96TC7 470 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MRI1Q9BV20 369 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MAF1Q9H063 256 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 CERS4Q9HA82 394 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 SMURF2Q9HAU4 748 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MAP3K20Q9NYL2 800 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 ISY1Q9ULR0 285 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 SLC45A2Q9UMX9 530 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MTO1Q9Y2Z2 717 aaKnown RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 UBIAD1Q9Y5Z9 338 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 MORC2Q9Y6X9 1032 aaPredicted RBP4.33□□□□□ -1.72
UBDP1-202ENST00000457888 CDH23Q9H251 3354 aa4.33□□□□□ -1.72
UBDP1-202ENST00000457888 DOCK5Q9H7D0 1870 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 GRIN2DO15399 1336 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 TCRBV7S2A1N4TA0A589 114 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 GCOM1H8Y6P7 765 aaPredicted RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 CPLX1O14810 134 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 TP73O15350 636 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 SLC37A4O43826 429 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 DHX16O60231 1041 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 STBD1O95210 358 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 POLR2MP0CAP2 368 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 HARSP12081 509 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 BRAFP15056 766 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 GCSHP23434 173 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ICAM3P32942 547 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 RGS2P41220 211 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 PIK3CGP48736 1102 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 MRPL12P52815 198 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ARFIP2P53365 341 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 NLRP5P59047 1200 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 CCNA1P78396 465 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 SSBP2P81877 361 aaPredicted RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ITGB3BPQ13352 177 aaPredicted RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 PMS2P11Q13670 270 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ACVR2BQ13705 512 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 LY6KQ17RY6 165 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 PABPC1LQ4VXU2 614 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 WDR78Q5VTH9 848 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 FBXO46Q6PJ61 603 aaPredicted RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ARMCX2Q7L311 632 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 UBE2Q1Q7Z7E8 422 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 FBXO16Q8IX29 292 aaPredicted RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 DIS3L2Q8IYB7 885 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 BLIDQ8IZY5 108 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ANKRD42Q8N9B4 389 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 KLHDC9Q8NEP7 349 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 TBCKQ8TEA7 893 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 LRRC15Q8TF66 581 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 TNPO1Q92973 898 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 INPP4AQ96PE3 977 aaPredicted RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 MTMR9Q96QG7 549 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 PCYT2Q99447 389 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 UPF2Q9HAU5 1272 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 SARS2Q9NP81 518 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 SLAMF7Q9NQ25 335 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 SACM1LQ9NTJ5 587 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 SIDT1Q9NXL6 827 aaKnown RBP4.32□□□□□ -1.72
UBDP1-202ENST00000457888 LUZP4Q9P127 313 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 FBXO40Q9UH90 709 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 OGDHLQ9ULD0 1010 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 ZNF236Q9UL36 1845 aa4.32□□□□□ -1.72
UBDP1-202ENST00000457888 TRIP12Q14669 1992 aaPredicted RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 WDR81Q562E7 1941 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 GSTTP1A0A1W2PQM5 241 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CCDC151A5D8V7 595 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 TMEM233B4DJY2 109 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KIAA0391O15091 583 aaKnown RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 MSH4O15457 936 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 TDP2O95551 362 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CCNE2O96020 404 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 MTHFD1P11586 935 aaKnown RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 MYCLP12524 364 aaPredicted RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 KCNA2P16389 499 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 EN2P19622 333 aaPredicted RBP4.31□□□□□ -1.72
UBDP1-202ENST00000457888 COPB2P35606 906 aa4.31□□□□□ -1.72
UBDP1-202ENST00000457888 CHKAP35790 457 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms