RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 POLD3Q15054 466 aaPredicted RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 TAZQ16635 292 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 IFI16Q16666 785 aaKnown RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 FNDC3BQ53EP0 1204 aaKnown RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF354CQ86Y25 554 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 RFX6Q8HWS3 928 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 CHPFQ8IZ52 775 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 MAML2Q8IZL2 1156 aaPredicted RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 PLD5Q8N7P1 536 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 HES6Q96HZ4 224 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 HHIPQ96QV1 700 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 HEMGNQ9BXL5 484 aa14.39□□□□□ -0.11
TIMP1-205ENST00000456754 ACE2Q9BYF1 805 aaPredicted RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 SPATA6Q9NWH7 488 aaPredicted RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 DDX56Q9NY93 547 aaKnown RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 SAE1Q9UBE0 346 aaPredicted RBP14.39□□□□□ -0.11
TIMP1-205ENST00000456754 hCG_1818297A0A087WSY0 165 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 A0A1W2PQF6 199 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 NCAM2O15394 837 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 PECAM1P16284 738 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 HTR7P34969 479 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 PXNP49023 591 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 MRPS21P82921 87 aaKnown RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 ECT2LQ008S8 904 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 DMC1Q14565 340 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 EIF4HQ15056 248 aaKnown RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 FBXO43Q4G163 708 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 MEI1Q5TIA1 1274 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 TMCO3Q6UWJ1 677 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 SYCE1Q8N0S2 351 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 SLC35F6Q8N357 371 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 DCAF4L2Q8NA75 395 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 DTWD2Q8NBA8 298 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 EXOC4Q96A65 974 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 CALR3Q96L12 384 aaKnown RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 TMEM245Q9H330 911 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 CD248Q9HCU0 757 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 MMP17Q9ULZ9 603 aa14.38□□□□□ -0.11
TIMP1-205ENST00000456754 FCF1Q9Y324 198 aaKnown RBP14.38□□□□□ -0.11
TIMP1-205ENST00000456754 CCDC66A2RUB6 948 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 CHURC1-FNTBB4DL54 471 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 RNF103O00237 685 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ENC1O14682 589 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ZSCAN12O43309 604 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SRCP12931 536 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 NTSR1P30989 418 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF135P52742 658 aaPredicted RBP14.37□□□□□ -0.11
TIMP1-205ENST00000456754 OXCT1P55809 520 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SERINC3Q13530 473 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SLC12A1Q13621 1099 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ENPP2Q13822 863 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 PREPLQ4J6C6 727 aaPredicted RBP14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF569Q5MCW4 686 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SLC9A4Q6AI14 798 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SERPINA13PQ6UXR4 307 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF783Q6ZMS7 281 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 CACUL1Q86Y37 369 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 MAP7D3Q8IWC1 876 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 RCOR2Q8IZ40 523 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SYNPOQ8N3V7 929 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 SPEM1Q8N4L4 309 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF557Q8N988 423 aaPredicted RBP14.37□□□□□ -0.11
TIMP1-205ENST00000456754 EXD1Q8NHP7 514 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 UCMAQ8WVF2 138 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 FAM118BQ9BPY3 351 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 C1QTNF1Q9BXJ1 281 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 TLR10Q9BXR5 811 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 MAGEH1Q9H213 219 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 CD93Q9NPY3 652 aa14.37□□□□□ -0.11
TIMP1-205ENST00000456754 EML5Q05BV3 1969 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 TCRBV7S2A1N4TA0A589 114 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 K7ESF4 209 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 FANCGO15287 622 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 TIMM44O43615 452 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 KDELR3O43731 214 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 CST8O60676 142 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF821O75541 412 aaPredicted RBP14.36□□□□□ -0.11
TIMP1-205ENST00000456754 ATP5BP06576 529 aaKnown RBP14.36□□□□□ -0.11
TIMP1-205ENST00000456754 EPHX1P07099 455 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 HOXB2P14652 356 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 NDST2P52849 883 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 RWDD2BP57060 319 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 PAFAH1B3Q15102 231 aaKnown RBP14.36□□□□□ -0.11
TIMP1-205ENST00000456754 NUDT18Q6ZVK8 323 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 SH2D3CQ8N5H7 860 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 FRS2Q8WU20 508 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 ZNF419Q96HQ0 510 aaPredicted RBP14.36□□□□□ -0.11
TIMP1-205ENST00000456754 GABRG3Q99928 467 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 C2orf49Q9BVC5 232 aaPredicted RBP14.36□□□□□ -0.11
TIMP1-205ENST00000456754 TNKS2Q9H2K2 1166 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 PDFQ9HBH1 243 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 PLA2G4CQ9UP65 541 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 HEY1Q9Y5J3 304 aa14.36□□□□□ -0.11
TIMP1-205ENST00000456754 TCRBV21S2A2A0A5A6 115 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms