RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
LINC00959-201ENST00000456581 TMLHEQ9NVH6 421 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ZNF180Q9UJW8 692 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ANGPTL2Q9UKU9 493 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 NOD1Q9Y239 953 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 TXNDC9O14530 226 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
LINC00959-201ENST00000456581 IDH3AP50213 366 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 RPS6KA3P51812 740 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 AP2B1P63010 937 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 DPYSL2Q16555 572 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 UPP1Q16831 310 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
LINC00959-201ENST00000456581 FAM35AQ86V20 835 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 SIX6OS1Q8N1H7 587 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ARHGAP24Q8N264 748 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 PIWIL2Q8TC59 973 aaKnown RBP12.69□□□□□ -0.38
LINC00959-201ENST00000456581 NMD3Q96D46 503 aaKnown RBP12.69□□□□□ -0.38
LINC00959-201ENST00000456581 AGAP3Q96P47 875 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 TRPV6Q9H1D0 765 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 THAP1Q9NVV9 213 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 CLIC5Q9NZA1 410 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 SOX13Q9UN79 622 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 PCDHA11Q9Y5I1 949 aa12.69□□□□□ -0.38
LINC00959-201ENST00000456581 ZBTB14O43829 449 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 SPAG6O75602 509 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 RTN3O95197 1032 aaPredicted RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 FAM200BP0CF97 657 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 ARSAP15289 507 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 TSHRP16473 764 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 MAGEA3P43357 314 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 IRF9Q00978 393 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 RBBP5Q15291 538 aaKnown RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 PPM1LQ5SGD2 360 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 NAPRTQ6XQN6 538 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 RASSF3Q86WH2 238 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 MAPK15Q8TD08 544 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 S100A14Q9HCY8 104 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 SYBUQ9NX95 663 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 DTLQ9NZJ0 730 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 TET1Q8NFU7 2136 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 NEMP1O14524 444 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 DGKIO75912 1065 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 MYCP01106 439 aaPredicted RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 BDNFP23560 247 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 SERPINB6P35237 376 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 CUL3Q13618 768 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 SLC25A52Q3SY17 297 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 EFHC1Q5JVL4 640 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 LGSNQ5TDP6 509 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 NCBP2-AS2Q69YL0 99 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 CD300LGQ6UXG3 332 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 PACS1Q6VY07 963 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 LRRTM3Q86VH5 581 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 SLC7A14Q8TBB6 771 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 TFB1MQ8WVM0 346 aaKnown RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 RTP4Q96DX8 246 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 GCNAQ96QF7 691 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 ZNF670Q9BS34 389 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 CPSF2Q9P2I0 782 aaKnown RBP12.68□□□□□ -0.38
LINC00959-201ENST00000456581 PDE4DIPQ5VU43 2346 aa12.68□□□□□ -0.38
LINC00959-201ENST00000456581 hCG_2014768A0A024R1R8 64 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 BCLAF3A2AJT9 711 aaKnown RBP12.67□□□□□ -0.38
LINC00959-201ENST00000456581 ANKRD33BA6NCL7 494 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 GPR182O15218 404 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 MFSD11O43934 449 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 PLIN3O60664 434 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 KPNA6O60684 536 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 TRPA1O75762 1119 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 ACADSBP45954 432 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 INHBCP55103 352 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 ITGA7Q13683 1181 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 SLC9B1Q4ZJI4 515 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 MFN1Q8IWA4 741 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 ZNF781Q8N8C0 355 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 MARK4Q96L34 752 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 AGAP2Q99490 1192 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 APOL2Q9BQE5 337 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 MOCS1Q9NZB8 636 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 CAPN8A6NHC0 703 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 F8W8V4 182 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 KCNK1O00180 336 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 TRDMT1O14717 391 aaKnown RBP12.67□□□□□ -0.38
LINC00959-201ENST00000456581 OPHN1O60890 802 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 IL1BP01584 269 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 RAG1P15918 1043 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 SAT1P21673 171 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 PSMB4P28070 264 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 PPP2R5DQ14738 602 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 TRIP10Q15642 601 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 C6orf163Q5TEZ5 329 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
LINC00959-201ENST00000456581 DHDDSQ86SQ9 333 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 OR10T2Q8NGX3 314 aa12.67□□□□□ -0.38
LINC00959-201ENST00000456581 MYLPFQ96A32 169 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms