RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ZNF302Q9NR11 478 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 CD274Q9NZQ7 290 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 LMCD1Q9NZU5 365 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 CCDC167Q9P0B6 97 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 LIMD1Q9UGP4 676 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ATPIF1Q9UII2 106 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 RPS6KA6Q9UK32 745 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 CNOT11Q9UKZ1 510 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 VANGL2Q9ULK5 521 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 TBC1D30Q9Y2I9 924 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 GMPPBQ9Y5P6 360 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 SLC30A1Q9Y6M5 507 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 SHPRHQ149N8 1683 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ADGRB1O14514 1584 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 LINC00854A0A1B0GVQ3 168 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 IFRD1O00458 451 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 CSPG5O95196 566 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HSMCR30P0CW71 290 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 MLNP12872 115 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HOXD12P35452 270 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 FSTL1Q12841 308 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 WDR72Q3MJ13 1102 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 EARS2Q5JPH6 523 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 KIAA0408Q6ZU52 694 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 KCTD8Q6ZWB6 473 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 MYO1HQ8N1T3 1032 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 BPIFB6Q8NFQ5 453 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 SHC3Q92529 594 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 TEKT5Q96M29 485 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 RBM4BQ9BQ04 359 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 RBM4Q9BWF3 364 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 KAT8Q9H7Z6 458 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 MAP3K20Q9NYL2 800 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 SLC17A7Q9P2U7 560 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 RABL2BQ9UNT1 228 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 GINS2Q9Y248 185 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 PRG3Q9Y2Y8 225 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ZCCHC11Q5TAX3 1644 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 TCRBV9S1A1TA0A576 114 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 TCRBV5S4A2TA0A5A2 114 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 GNB5O14775 395 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 NRP2O60462 931 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 F9P00740 461 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 C8BP07358 591 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HIST1H2AGP0C0S8 130 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ATF6P18850 670 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HIST1H2ADP20671 130 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ITGAXP20702 1163 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 FGFR3P22607 806 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ANXA11P50995 505 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 OXCT1P55809 520 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 WDR4P57081 412 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 CDH17Q12864 832 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 AARS2Q5JTZ9 985 aaKnown RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HYIQ5T013 277 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 TIGD7Q6NT04 549 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 BNIPLQ7Z465 357 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 SVOPLQ8N434 492 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 MARCH10Q8NA82 808 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 SLC44A5Q8NCS7 719 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF540Q8NDQ6 660 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 DNAJC19Q96DA6 116 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HIST1H2AHQ96KK5 128 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 HIST1H2AJQ99878 128 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 MXRA8Q9BRK3 442 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 H2AFJQ9BTM1 129 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 RIBC2Q9H4K1 309 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 REEP1Q9H902 201 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 RGS18Q9NS28 235 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 IFT80Q9P2H3 777 aaPredicted RBP5.08□□□□□ -1.6
PCDH9-203ENST00000456367 MORF4L1Q9UBU8 362 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 AKT3Q9Y243 479 aa5.08□□□□□ -1.6
PCDH9-203ENST00000456367 LOC102724428A0A0B4J2F2 783 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 IRGMA1A4Y4 181 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 PIPSLA2A3N6 862 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TPP1O14773 563 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MSH4O15457 936 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 TMCC2O75069 709 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SEMA3DO95025 777 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SLC4A1P02730 911 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 UGT2B4P06133 528 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ASNSP08243 561 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 DBTP11182 482 aaKnown RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 KDELR1P24390 212 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 AKR1D1P51857 326 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SIK1P57059 783 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 MCCD1P59942 119 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 LGALS3BPQ08380 585 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ARHGEF6Q15052 776 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 PRKD1Q15139 912 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ERFEQ4G0M1 354 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SV2AQ7L0J3 742 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 CHCHD4Q8N4Q1 142 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 UBR7Q8N806 425 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 COLGALT1Q8NBJ5 622 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 GALNT6Q8NCL4 622 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 SPIRE2Q8WWL2 714 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 NXNL1Q96CM4 212 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 NODALQ96S42 347 aa5.07□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF347Q96SE7 839 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms