RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 IGFBP6P24592 240 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 RBL1P28749 1068 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SREBF1P36956 1147 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 ARCN1P48444 511 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 COPAP53621 1224 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MCCD1P59942 119 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 BASP1P80723 227 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 VARS2Q5ST30 1063 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 GALNT18Q6P9A2 607 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 BPHLQ86WA6 291 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 UBR7Q8N806 425 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KYQ8NBH2 561 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MCEEQ96PE7 176 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 MROQ9BYG7 248 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC7A5P2Q9GIP4 190 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 POLR1BQ9H9Y6 1135 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SSU72Q9NP77 194 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 EGFL7Q9UHF1 273 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 KIAA1257Q9ULG3 409 aa4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 DIS3Q9Y2L1 958 aaKnown RBP4.64□□□□□ -1.67
DEPDC1-202ENST00000456315 SIPA1L1O43166 1804 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 C1orf232A0A0U1RR37 186 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 DDX39AO00148 427 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TNFAIP8O95379 198 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 COX4I1P13073 169 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ENO3P13929 434 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TFEBP19484 476 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 EIF2AK2P19525 551 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CDH3P22223 829 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NUDT2P50583 147 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 IL1RL1Q01638 556 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NEDD8Q15843 81 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MAP7D1Q3KQU3 841 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ASPRV1Q53RT3 343 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ARL13AQ5H913 290 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GSTA5Q7RTV2 222 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 C17orf50Q8WW18 174 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TAMM41Q96BW9 452 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CDCA5Q96FF9 252 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 C3orf30Q96M34 536 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CFAP57Q96MR6 1250 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 OLFM3Q96PB7 478 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 BARD1Q99728 777 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GLT8D2Q9H1C3 349 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CARS2Q9HA77 564 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PCDH9Q9HC56 1237 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ANLNQ9NQW6 1124 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CHRAC1Q9NRG0 131 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 RAB6BQ9NRW1 208 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GPATCH2LQ9NWQ4 482 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM198AQ9UFP1 575 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 DAGLAQ9Y4D2 1042 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MRPL42Q9Y6G3 142 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC78A2IDD5 438 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 LINC01387J3KSC0 135 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TM9SF1O15321 606 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GPC4O75487 556 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 STBD1O95210 358 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GGPS1O95749 300 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 HTR1BP28222 390 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ELK4P28324 431 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ADSLP30566 484 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PIGAP37287 484 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MAP7Q14244 749 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 N4BP2L1Q5TBK1 243 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 RNF19BQ6ZMZ0 732 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC80Q76M96 950 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MFSD6LQ8IWD5 586 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM20CQ8IXL6 584 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CHPFQ8IZ52 775 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PLD5Q8N7P1 536 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SMG8Q8ND04 991 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ICA1LQ8NDH6 482 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 LPGAT1Q92604 370 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ALPK1Q96QP1 1244 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NUF2Q9BZD4 464 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NTN4Q9HB63 628 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SENP1Q9P0U3 644 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 POLLQ9UGP5 575 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SERPINB13Q9UIV8 391 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 OAZ3Q9UMX2 235 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TSC22D4Q9Y3Q8 395 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SBF2Q86WG5 1849 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC12A8A0AV02 714 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 A8MX80 341 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 KCNU1A8MYU2 1149 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SPECC1L-ADORA2AF8WAN1 911 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SGK1O00141 431 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC16A3O15427 465 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MAFGO15525 162 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 BCAS1O75363 584 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GRAP2O75791 330 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SEMA3DO95025 777 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SERPINB2P05120 415 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM58BPP0C7Q3 252 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NAT2P11245 290 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 JAK1P23458 1154 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SSTR4P31391 388 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GSSP48637 474 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 RPS6P62753 249 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms