RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TM9SF3Q9HD45 589 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 RTN4Q9NQC3 1192 aaKnown RBP18.32■□□□□ 0.52
MSH6-207ENST00000456246 MPP6Q9NZW5 540 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 SERGEFQ9UGK8 458 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 VPS51Q9UID3 782 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 CHD8Q9HCK8 2581 aa18.32■□□□□ 0.52
MSH6-207ENST00000456246 CXorf51AA0A1B0GTR3 108 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 A0A1W2PPC4 97 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 FAM170AA1A519 330 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 MCF2LO15068 1137 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 SRGAP2O75044 1071 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 IGHV4-34P06331 123 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 CD59P13987 128 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 CDO1Q16878 200 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 CCDC14Q49A88 953 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 RETSATQ6NUM9 610 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 NCEH1Q6PIU2 408 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 MON1BQ7L1V2 547 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 AADATQ8N5Z0 425 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 ATP11CQ8NB49 1132 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 CENPIQ92674 756 aaPredicted RBP18.31■□□□□ 0.52
MSH6-207ENST00000456246 NTAN1Q96AB6 310 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 FAM131CQ96AQ9 280 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 SKA1Q96BD8 255 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 PSMB7Q99436 277 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 OSBPL2Q9H1P3 480 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
MSH6-207ENST00000456246 A0A1W2PQC6 194 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 FAM47DPA6NHR8 397 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 SIGLEC16A6NMB1 481 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 SRCP12931 536 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 VAV1P15498 845 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 GPD1P21695 349 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 ADRA1BP35368 520 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 NUDT1P36639 197 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 ADPRHP54922 357 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 RACK1P63244 317 aaKnown RBP18.3■□□□□ 0.52
MSH6-207ENST00000456246 SLC20A2Q08357 652 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 C15orf59Q2T9L4 293 aaPredicted RBP18.3■□□□□ 0.52
MSH6-207ENST00000456246 DNAJC24Q6P3W2 148 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 Q6ZVU0 165 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 ADAT2Q7Z6V5 191 aaKnown RBP18.3■□□□□ 0.52
MSH6-207ENST00000456246 OR2I1PQ8NGU4 316 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 OR14C36Q8NHC7 312 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 JOSD2Q8TAC2 188 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 GAREM1Q9H706 876 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 TMPRSS4Q9NRS4 437 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 OR12D3Q9UGF7 316 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 PPM1HQ9ULR3 514 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 PCDHGB2Q9Y5G2 931 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 CEP295Q9C0D2 2601 aa18.3■□□□□ 0.52
MSH6-207ENST00000456246 KNL1Q8NG31 2342 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 EPG5Q9HCE0 2579 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 A0A1B0GVT2 93 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 C10orf142B7Z368 130 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 DFNA5O60443 496 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 TRIM16O95361 564 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 PTMSP20962 102 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 RFC1P35251 1148 aaPredicted RBP18.29■□□□□ 0.52
MSH6-207ENST00000456246 DRD3P35462 400 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 RECQLP46063 649 aaPredicted RBP18.29■□□□□ 0.52
MSH6-207ENST00000456246 MAPKAPK2P49137 400 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 CSNK1EP49674 416 aaKnown RBP18.29■□□□□ 0.52
MSH6-207ENST00000456246 NUMBP49757 651 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 TPM4P67936 248 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 SCAPQ12770 1279 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 HLA-BQ31612 363 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 MANEALQ5VSG8 457 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 NAXDQ8IW45 347 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 PIP4K2CQ8TBX8 421 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 FAM172AQ8WUF8 416 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 VCPIP1Q96JH7 1222 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 CNTNAP3BQ96NU0 1288 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 ACE2Q9BYF1 805 aaPredicted RBP18.29■□□□□ 0.52
MSH6-207ENST00000456246 CNTNAP3Q9BZ76 1288 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 CEP44Q9C0F1 390 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 ZNF212Q9UDV6 495 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 ANKRD6Q9Y2G4 727 aa18.29■□□□□ 0.52
MSH6-207ENST00000456246 A0A0D9SEW6 157 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 VILLO15195 856 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 TEX33O43247 280 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 SNAP91O60641 907 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 PRNPP04156 253 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 RHOQP17081 205 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 ZNF143P52747 638 aaPredicted RBP18.28■□□□□ 0.52
MSH6-207ENST00000456246 AIF1P55008 147 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 HDAC4P56524 1084 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 C21orf59P57076 290 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 GEMIN4P57678 1058 aaKnown RBP18.28■□□□□ 0.52
MSH6-207ENST00000456246 SIM1P81133 766 aaPredicted RBP18.28■□□□□ 0.52
MSH6-207ENST00000456246 GNA12Q03113 381 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 SUZ12Q15022 739 aaKnown RBP18.28■□□□□ 0.52
MSH6-207ENST00000456246 KLHL40Q2TBA0 621 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 ACAD10Q6JQN1 1059 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 WDR59Q6PJI9 974 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 IRF2BP2Q7Z5L9 587 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 PHLDB2Q86SQ0 1253 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 BAP1Q92560 729 aa18.28■□□□□ 0.52
MSH6-207ENST00000456246 ORAI3Q9BRQ5 295 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms