RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 BEND7Q8N7W2 519 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CSGALNACT1Q8TDX6 532 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 IPCEF1Q8WWN9 437 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CHID1Q9BWS9 393 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SLC24A3Q9HC58 644 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FAM237AA0A1B0GTK4 181 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 NPIPA7E9PJI5 369 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 GOLGA8SH3BPF8 625 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 AGR2O95994 175 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 NPIPA8P0DM63 369 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 EIF4BP23588 611 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 BTDP43251 543 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 PON3Q15166 354 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FAM91A1Q658Y4 838 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF549Q6P9A3 640 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TRPV3Q8NET8 790 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SLC13A1Q9BZW2 595 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 MAGED2Q9UNF1 606 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 IFNGP01579 166 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 MMP13P45452 471 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 OR6B2Q6IFH4 312 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 DPP9Q86TI2 863 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 KBTBD2Q8IY47 623 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ALLCQ8N6M5 410 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TATDN2Q93075 761 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZIM3Q96PE6 472 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 LRRC1Q9BTT6 524 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 GALNT8Q9NY28 637 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SSR3Q9UNL2 185 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CEMIPQ8WUJ3 1361 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 A0A0G2JPF8 293 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 HNRNPCL3B7ZW38 293 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CYP7B1O75881 506 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 HNRNPCL4P0DMR1 293 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ALOX15P16050 662 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 AXLP30530 894 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ANKS6Q68DC2 871 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CAPN12Q6ZSI9 719 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SLC22A15Q8IZD6 547 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ELMO1Q92556 727 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TDRD1Q9BXT4 1180 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF302Q9NR11 478 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 KLHL11Q9NVR0 708 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF232Q9UNY5 417 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TESMINQ9Y4I5 508 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 V9GYQ6 96 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 AIM2O14862 343 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ST8SIA6P61647 398 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TIGD4Q8IY51 512 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ATG16L2Q8NAA4 619 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 DCPSQ96C86 337 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TCF12Q99081 682 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 C6orf62Q9GZU0 229 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 FAM86C1Q9NVL1 165 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 GULP1Q9UBP9 304 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 RGPD1P0DJD0 1748 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 EMSYQ7Z589 1322 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 M0QYV0 167 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 NKRFO15226 690 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CSDE1O75534 798 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ASLP04424 464 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ODC1P11926 461 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 MYL9P24844 172 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CHRNA5P30532 468 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 USP10Q14694 798 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 MEA1Q16626 185 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 HKDC1Q2TB90 917 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 QSOX2Q6ZRP7 698 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 BRSK2Q8IWQ3 736 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 LRRC20Q8TCA0 184 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZHX1-C8orf76Q96EF9 292 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 C7orf50Q9BRJ6 194 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 IGSF9Q9P2J2 1179 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ZNF70Q9UC06 446 aaPredicted RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ANGPT4Q9Y264 503 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ALG6Q9Y672 507 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 MED12LQ86YW9 2145 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SCN10AQ9Y5Y9 1956 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 URADA6NGE7 173 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 PDPK1O15530 556 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 KCNH1O95259 989 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 CALCAP01258 141 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 AKR1B1P15121 316 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 LHX1P48742 406 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 AP1S1P61966 158 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 GPSM2P81274 684 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TMEM110Q86TL2 294 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 GPRASP2Q96D09 838 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 THUMPD3Q9BV44 507 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 DDX18Q9NVP1 670 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 PTPRJQ12913 1337 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SCGNO76038 276 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SLC25A27O95847 323 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 TSPAN19P0C672 248 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 RPL14P50914 215 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 GALCP54803 685 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 SLC7A5Q01650 507 aa5.29□□□□□ -1.56
CSMD3-204ENST00000455883 ALDH6A1Q02252 535 aaKnown RBP5.29□□□□□ -1.56
CSMD3-204ENST00000455883 PUDPQ08623 228 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms