RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 PDE11AQ9HCR9 933 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 SEPSECSQ9HD40 501 aaKnown RBP5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 SIX2Q9NPC8 291 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 KCND1Q9NSA2 647 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM207AQ9NSI2 230 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 AGPAT5Q9NUQ2 364 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 TDP1Q9NUW8 608 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 RBAKQ9NYW8 714 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 GULP1Q9UBP9 304 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 GIMAP2Q9UG22 337 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 VPS28Q9UK41 221 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 CPSF3Q9UKF6 684 aaKnown RBP5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 COQ4Q9Y3A0 265 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 TRPV2Q9Y5S1 764 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 SNX5Q9Y5X3 404 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 X6R8D5 127 aa5.45□□□□□ -1.54
HMGB1P4-201ENST00000455362 TET1Q8NFU7 2136 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM234BA2RU67 622 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 LACTBL1A8MY62 500 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 C9orf172C9J069 976 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM229AH3BQW9 127 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 PIP5K1BO14986 540 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SGTAO43765 313 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 DOK2O60496 412 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 B4GALT4O60513 344 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 N4BP1O75113 896 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SGPL1O95470 568 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 TFRCP02786 760 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM87AP0C7U9 286 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 DLATP10515 647 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SKILP12757 684 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 TNNI1P19237 187 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 EN2P19622 333 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 HNRNPH3P31942 346 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 THPOP40225 353 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 POLD2P49005 469 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CTCFP49711 727 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CLK1P49759 484 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 RPS16P62249 146 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 HTRA4P83105 476 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CCZ1BP86790 482 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CCZ1P86791 482 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 MYL7Q01449 175 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SLC6A3Q01959 620 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ROM1Q03395 351 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 MGAT3Q09327 533 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CETN1Q12798 172 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SLC12A1Q13621 1099 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 EFR3AQ14156 821 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 MYBPC3Q14896 1274 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 RAB30Q15771 203 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CYP27C1Q4G0S4 372 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 KHDC1Q4VXA5 237 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 EPC2Q52LR7 807 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 UBXN11Q5T124 520 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 MROH9Q5TGP6 573 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 KRT39Q6A163 491 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 NOTUMQ6P988 496 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SLC27A1Q6PCB7 646 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 TRIM65Q6PJ69 517 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 WDR59Q6PJI9 974 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SEZ6L2Q6UXD5 910 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 UNQ6494/PRO21346Q6UXR6 183 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 RNF44Q7L0R7 432 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM228AQ86W67 206 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CILP2Q8IUL8 1156 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 TMEM139Q8IV31 216 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CNGA4Q8IV77 575 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CCDC117Q8IWD4 279 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 BRSK2Q8IWQ3 736 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 THNSL1Q8IYQ7 743 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ARL10Q8N8L6 244 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF397Q8NF99 534 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 STT3BQ8TCJ2 826 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 BRIX1Q8TDN6 353 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ADAMTS15Q8TE58 950 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ASB15Q8WXK1 588 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SYN2Q92777 582 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SEMA4DQ92854 862 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZUFSPQ96AP4 578 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 LRRC46Q96FV0 321 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ZNF333Q96JL9 665 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ASB2Q96Q27 587 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 FNBP1Q96RU3 617 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 INTS2Q9H0H0 1204 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 GANQ9H2C0 597 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 GHITMQ9H3K2 345 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 RPF1Q9H9Y2 349 aaKnown RBP5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 GCNT4Q9P109 453 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 CEP72Q9P209 647 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 FBXL5Q9UKA1 691 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 PYCARDQ9ULZ3 195 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 ST3GAL5Q9UNP4 418 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 PTPRJQ12913 1337 aa5.44□□□□□ -1.54
HMGB1P4-201ENST00000455362 SCN1AP35498 2009 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 FAM181BA6NEQ2 426 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 M0QZ92 97 aa5.43□□□□□ -1.54
HMGB1P4-201ENST00000455362 RPS6KA5O75582 802 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms