RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GFRA2O00451 464 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ZNF197O14709 1029 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TM9SF1O15321 606 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TEX28O15482 410 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ADAM12O43184 909 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 RASA4O43374 803 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 COCHO43405 550 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 PRAMEF11O60813 436 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 XYLBO75191 536 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 NEBLO76041 1014 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ZWINTO95229 277 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 LUC7L3O95232 432 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MYCP01106 439 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SHBGP04278 402 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 CA4P22748 312 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MAPK8P45983 427 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 GPR15P49685 360 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 GPX6P59796 221 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC20A2Q08357 652 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TWF1Q12792 350 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 POLD3Q15054 466 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ARHGAP15Q53QZ3 475 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MARC1Q5VT66 337 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 MARK2Q7KZI7 788 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TMEM135Q86UB9 458 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 CHSY1Q86X52 802 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 TTC9BQ8N6N2 239 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 BADQ92934 168 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 ARHGEF2Q92974 986 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 CABS1Q96KC9 395 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 C9orf72Q96LT7 481 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 CDCA3Q99618 268 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC39A8Q9C0K1 460 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 PRKAG3Q9UGI9 489 aa6.98□□□□□ -1.29
ECHDC1-210ENST00000454859 NUP210Q8TEM1 1887 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 E2F8A0AVK6 867 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 ZBBXA8MT70 800 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 MSI1O43347 362 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 KDELR3O43731 214 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 TLL1O43897 1013 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 STC2O76061 302 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 INHBAP08476 426 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 CNPP09543 421 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 HOXB8P17481 243 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 PAMP19021 973 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 VASPP50552 380 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 PAPOLAP51003 745 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 NSUN2Q08J23 767 aaKnown RBP eCLIP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 UGP2Q16851 508 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 INO80DQ53TQ3 878 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 Q6ZNB5 142 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 RGS9BPQ6ZS82 235 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 ZNF534Q76KX8 674 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 TRABD2AQ86V40 505 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 KLHL23Q8NBE8 558 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 GIPC2Q8TF65 315 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 GRAMD1AQ96CP6 724 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 IMP4Q96G21 291 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 B3GALT6Q96L58 329 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 RPRD1AQ96P16 312 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 KIFC1Q9BW19 673 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 MAGEB5Q9BZ81 275 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 EPN3Q9H201 632 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 KIF9Q9HAQ2 790 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 IL21Q9HBE4 155 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 TLR9Q9NR96 1032 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 NKIRAS1Q9NYS0 192 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 SOX13Q9UN79 622 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 ARHGAP26Q9UNA1 814 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 FAM169AQ9Y6X4 670 aa6.97□□□□□ -1.29
ECHDC1-210ENST00000454859 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 TCRBV9S1A1TA0A576 114 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 C2orf71A6NGG8 1288 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ZBTB24O43167 697 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 SIN3BO75182 1162 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 SNRPAP09012 282 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 PTPN2P17706 415 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 KRT15P19012 456 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 PSMB4P28070 264 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ADRA1AP35348 466 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 CSNK1DP48730 415 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 IRAK1P51617 712 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 PLK1P53350 603 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 CSE1LP55060 971 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 GNA12Q03113 381 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 MGAT5Q09328 741 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 ZNF177Q13360 481 aaPredicted RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 FAM133BQ5BKY9 247 aaKnown RBP6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 PCID2Q5JVF3 399 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 KIAA0408Q6ZU52 694 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 OTOP2Q7RTS6 562 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 TMC7Q7Z402 723 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 EXOC3L1Q86VI1 746 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 TRIM42Q8IWZ5 723 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 KREMEN2Q8NCW0 462 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 OR2W6PQ8NHA6 318 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 RAB3IL1Q8TBN0 382 aa6.96□□□□□ -1.29
ECHDC1-210ENST00000454859 SPPL3Q8TCT6 385 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms