RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 ARHGEF38Q9NXL2 777 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 SUFUQ9UMX1 484 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.77□□□□□ -0.37
ECHDC1-209ENST00000454591 A0A096LPK6 155 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 MYBPHLA2RUH7 354 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 MAP3K7O43318 606 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 ZNF623O75123 536 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 CABYRO75952 493 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 AMHP03971 560 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 C2P06681 752 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 NCAM1P13591 858 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 NFKB1P19838 968 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 GLDCP23378 1020 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 CRABP2P29373 138 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 PSEN1P49768 467 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 NKX3-2P78367 333 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 XIAPP98170 497 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 KDSRQ06136 332 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 HNRNPDQ14103 355 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 RCN2Q14257 317 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 ANO4Q32M45 955 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 PPM1JQ5JR12 505 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 BRMS1LQ5PSV4 323 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 MANEALQ5VSG8 457 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 ZYG11AQ6WRX3 759 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 KCNMB4Q86W47 210 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 TMEM151AQ8N4L1 468 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 FATE1Q969F0 183 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 VPS39Q96JC1 886 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 FCRL5Q96RD9 977 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 HAPLN3Q96S86 360 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 RTKNQ9BST9 563 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 THTPAQ9BU02 230 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 WDCPQ9H6R7 721 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 FAM105AQ9NUU6 356 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 PNPOQ9NVS9 261 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 OXSMQ9NWU1 459 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 ZDHHC7Q9NXF8 308 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 OR12D3Q9UGF7 316 aa12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 AAR2Q9Y312 384 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-209ENST00000454591 TARM1B6A8C7 271 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 SLCO1B7G3V0H7 640 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 FGF10O15520 208 aaPredicted RBP12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 LRIG2O94898 1065 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 MYL3P08590 195 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 SRGAP2BP0DMP2 458 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 IRX4P78413 519 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 UGP2Q16851 508 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 PCID2Q5JVF3 399 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 ARTNQ5T4W7 220 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 ZC3HC1Q86WB0 502 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 PLD6Q8N2A8 252 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 CPSF7Q8N684 471 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 STYXQ8WUJ0 223 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 PDCD6IPQ8WUM4 868 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 GATA6Q92908 595 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 ZFP42Q96MM3 310 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 RTP3Q9BQQ7 232 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 DRC3Q9H069 523 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 NMRAL1Q9HBL8 299 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 VPS28Q9UK41 221 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 RAP2CQ9Y3L5 183 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 DOCK3Q8IZD9 2030 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 SHROOM3Q8TF72 1996 aa12.75□□□□□ -0.37
ECHDC1-209ENST00000454591 ARHGAP42A6NI28 874 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 M0QZ92 97 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 M0QZQ0 153 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 MATN2O00339 956 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 ANXA9O76027 345 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 USP17L7P0C7H9 530 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 PIM1P11309 404 aaPredicted RBP12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 ODC1P11926 461 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 CACNA2D1P54289 1103 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 ILF2Q12905 390 aaKnown RBP12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 HERC3Q15034 1050 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 UPP1Q16831 310 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 HSP90AA5PQ58FG0 334 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 SH2D4BQ5SQS7 431 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 PRAMEF19Q5SWL8 479 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 CERCAMQ5T4B2 595 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 LIPMQ5VYY2 423 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 BSPRYQ5W0U4 402 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 AFMIDQ63HM1 303 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 CES3Q6UWW8 571 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 CMC1Q7Z7K0 106 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 ARHGAP12Q8IWW6 846 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 CNTD1Q8N815 330 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 DNAAF3Q8N9W5 541 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 MFSD3Q96ES6 412 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 KCNK16Q96T55 309 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 TKTL2Q9H0I9 626 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms